myRT

myRT report for GCA_900506705.1_19506_1_29

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Seq: UJPC01000016.1 Klebsiella pneumoniae strain EuSCAPE_BE050 genome assembly, contig: 19506_129SCcontig000016, whole genome shotgun sequence (94129 bp)
Overview 1 RT 1: 25609-28671 bp Neighborhood of RT #1 [25609, 28688] PRK10724 SmpB RVT-UG11 PRK09678 Feature: gene Location: 25609-26046 bp Ori: SWQ23169.1 Gene: ratA Feature: domain Description: PRK10724 Location: 25612-26041 bp Feature: domain Description: PRK1 0724 Location: 2561 2-26041 bp Feature: gene Location: 26196-26678 bp Ori: SWQ23170.1 Gene: smpB Feature: domain Description: SmpB Location: 26226-26670 bp Feature: domain Description: SmpB Location: 26226-26670 bp Feature: gene Location: 27293-28066 bp Ori: SWQ23171.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27428-27881 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 27428-27881 bp Feature: gene Location: 28035-28208 bp Feature: gene Location: 28470-28688 bp Ori: SWQ23173.1 Feature: domain Description: PRK09678 Location: 28473-28671 bp Feature: domain Description: PRK09678 Location: 28473-28671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: UJPC01000005.1 Klebsiella pneumoniae strain EuSCAPE_BE050 genome assembly, contig: 19506_129SCcontig000005, whole genome shotgun sequence (389866 bp)
Overview 1 RT 1: 359847-367464 bp Neighborhood of RT #1 [359847, 367499] Nuc_deoxyrib_tr RVT-Retrons AAA_15 DUF4917 Feature: gene Location: 359847-360098 bp Feature: gene Location: 360095-360964 bp Ori: SWQ17275.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 360617-360788 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 360617-360788 bp Feature: gene Location: 361620-362720 bp Ori: SWQ17277.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 361800-362334 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 361800-362 334 bp Feature: gene Location: 362835-365081 bp Ori: SWQ17279.1 Feature: domain Description: AAA_15 Location: 362838-363846 bp Feature: domain Description: AAA_15 Location: 362 838-363846 bp Feature: gene Location: 366480-367499 bp Ori: SWQ17281.1 Feature: domain Description: DUF4917 Location: 366540-367464 bp Feature: domain Description: DUF4917 Location: 366540-367464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263)