myRT

myRT report for GCA_900507065.1_19506_1_75

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Seq: UJQC01000008.1 Klebsiella pneumoniae strain EuSCAPE_BE099 genome assembly, contig: 19506_175SCcontig000008, whole genome shotgun sequence (274154 bp)
Overview 1 RT 1: 221396-228264 bp Neighborhood of RT #1 [221396, 228266] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 221396-222124 bp Feature: domain Description: FimC Location: 221429-222107 bp Feature: domain Description: FimC Location: 221 429-2221 07 bp Feature: gene Location: 222156-224765 bp Feature: domain Description: FimD Location: 222213-224754 bp Feature: domain Description: FimD Location: 22221 3-224754 bp Feature: gene Location: 224765-226843 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225173-225617 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2251 73-22561 7 bp Feature: gene Location: 226900-227340 bp Feature: domain Description: Integrase_1 Location: 226906-227122 bp Feature: domain Description: Integrase_1 Location: 226906-2271 22 bp Feature: gene Location: 227601-228266 bp Feature: domain Description: INT_P4_C Location: 227706-228264 bp Feature: domain Description: INT_P4_C Location: 227706-228264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UJQC01000021.1 Klebsiella pneumoniae strain EuSCAPE_BE099 genome assembly, contig: 19506_175SCcontig000021, whole genome shotgun sequence (61691 bp)
Overview 1 RT 1: 49016-52286 bp Neighborhood of RT #1 [49016, 52300] RVT-GII PRK10276 Feature: gene Location: 49016-49231 bp Feature: gene Location: 49498-49728 bp Feature: gene Location: 49962-51473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: gene Location: 51524-51757 bp Feature: gene Location: 51875-52300 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Feature: domain Description: PRK102 76 Location: 51878-52 2 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)