myRT

myRT report for GCA_900507125.1_19506_1_78

Download annotations/find similar RTs

Seq: UJQG01000013.1 Klebsiella pneumoniae strain EuSCAPE_BE102 genome assembly, contig: 19506_178SCcontig000013, whole genome shotgun sequence (117270 bp)
Overview 1 RT 1: 45889-52742 bp Neighborhood of RT #1 [45889, 52759] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 45889-46554 bp Feature: domain Description: INT_P4_C Location: 45994-46552 bp Feature: domain Description: INT_P4_C Location: 45994-46552 bp Feature: gene Location: 46815-47255 bp Feature: domain Description: Integrase_1 Location: 46821-47037 bp Feature: domain Description: Integrase_1 Location: 46821 -47037 bp Feature: gene Location: 47312-49390 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47720-48164 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47720-481 64 bp Feature: gene Location: 49390-51999 bp Feature: domain Description: FimD Location: 49447-51988 bp Feature: domain Description: FimD Location: 49447-51 988 bp Feature: gene Location: 52031-52759 bp Feature: domain Description: FimC Location: 52064-52742 bp Feature: domain Description: FimC Location: 52064-52742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: UJQG01000022.1 Klebsiella pneumoniae strain EuSCAPE_BE102 genome assembly, contig: 19506_178SCcontig000022, whole genome shotgun sequence (61871 bp)
Overview 1 RT 1: 9572-12756 bp Neighborhood of RT #1 [9572, 12756] PRK10276 RVT-GII Feature: gene Location: 9572-9997 bp Feature: domain Description: PRK10276 Location: 9575-9983 bp Feature: domain Description: PRK102 76 Location: 9575-9983 bp Feature: gene Location: 10115-10348 bp Feature: gene Location: 10399-11910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10804-11518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10804-11518 bp Feature: gene Location: 12144-12374 bp Feature: gene Location: 12433-12756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII