myRT

myRT report for GCA_900507885.1_19646_2_7

Download annotations/find similar RTs

Seq: UJTF01000001.1 Klebsiella pneumoniae strain EuSCAPE_BE110 genome assembly, contig: 19646_27SCcontig000001, whole genome shotgun sequence (765942 bp)
Overview 1 RT 1: 537563-544415 bp Neighborhood of RT #1 [537563, 544432] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 537563-538228 bp Feature: domain Description: INT_P4_C Location: 537668-538226 bp Feature: domain Description: INT_P4_C Location: 537668-538226 bp Feature: gene Location: 538536-538928 bp Feature: domain Description: Integrase_1 Location: 538542-538758 bp Feature: domain Description: Integrase_1 Location: 538542-538758 bp Feature: gene Location: 538985-541063 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 539393-539837 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 539393-539837 bp Feature: gene Location: 541063-543672 bp Feature: domain Description: FimD Location: 541120-543661 bp Feature: domain Description: FimD Location: 541 1 20-543661 bp Feature: gene Location: 543704-544432 bp Feature: domain Description: FimC Location: 543737-544415 bp Feature: domain Description: FimC Location: 543737-54441 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: UJTF01000023.1 Klebsiella pneumoniae strain EuSCAPE_BE110 genome assembly, contig: 19646_27SCcontig000023, whole genome shotgun sequence (58507 bp)
Overview 1 RT 1: 49016-52286 bp Neighborhood of RT #1 [49016, 52300] RVT-GII PRK10276 Feature: gene Location: 49016-49231 bp Feature: gene Location: 49498-49728 bp Feature: gene Location: 49962-51473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: gene Location: 51524-51757 bp Feature: gene Location: 51875-52300 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Feature: domain Description: PRK102 76 Location: 51878-52 2 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UJTF01000047.1 Klebsiella pneumoniae strain EuSCAPE_BE110 genome assembly, contig: 19646_27SCcontig000047, whole genome shotgun sequence (1917 bp)
Overview 1 RT 1: 62-1915 bp Neighborhood of RT #1 [62, 1915] RVT-GII Feature: gene Location: 62-1549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1157 bp Feature: gene Location: 1703-1915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII