myRT

myRT report for GCA_900508625.1_19646_3_20

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Seq: UJWD01000009.1 Klebsiella pneumoniae strain EuSCAPE_TR188 genome assembly, contig: 19646_320SCcontig000009, whole genome shotgun sequence (348890 bp)
Overview 1 RT 1: 33446-39621 bp Neighborhood of RT #1 [33446, 39638] Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 33446-33589 bp Feature: gene Location: 33694-34134 bp Feature: domain Description: Integrase_1 Location: 33700-33916 bp Feature: domain Description: Integrase_1 Location: 33700-3391 6 bp Feature: gene Location: 34191-36269 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34599-35043 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 34599-35043 bp Feature: gene Location: 36269-38878 bp Feature: domain Description: FimD Location: 36326-38867 bp Feature: domain Description: FimD Location: 36326-38867 bp Feature: gene Location: 38910-39638 bp Feature: domain Description: FimC Location: 38943-39621 bp Feature: domain Description: FimC Location: 38943-39621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: UJWD01000023.1 Klebsiella pneumoniae strain EuSCAPE_TR188 genome assembly, contig: 19646_320SCcontig000023, whole genome shotgun sequence (14084 bp)
Overview 1 RT 1: 6081-9265 bp Neighborhood of RT #1 [6081, 9265] PRK10276 RVT-GII Feature: gene Location: 6081-6506 bp Feature: domain Description: PRK10276 Location: 6084-6492 bp Feature: domain Description: PRK102 76 Location: 6084-6492 bp Feature: gene Location: 6624-6857 bp Feature: gene Location: 6908-8419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7313-8027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7313-802 7 bp Feature: gene Location: 8653-8883 bp Feature: gene Location: 8942-9265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII