myRT

myRT report for GCA_900508985.1_19646_3_78

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Seq: UJXO01000021.1 Klebsiella pneumoniae strain EuSCAPE_TR254 genome assembly, contig: 19646_378SCcontig000021, whole genome shotgun sequence (24488 bp)
Overview 1 RT 1: 22295-24137 bp Neighborhood of RT #1 [22295, 24382] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 22295-22699 bp Ori: SXB72568.1 Feature: domain Description: InsE Location: 22325-22661 bp Feature: domain Description: InsE Location: 22325-22661 bp Feature: gene Location: 22728-23084 bp Ori: SXB72569.1 Feature: domain Description: PHA02517 Location: 22731-23040 bp Feature: domain Description: PHA0251 7 Location: 22731 -23040 bp Feature: gene Location: 23201-24382 bp Ori: SXB72570.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23207-23864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23207-23864 bp Feature: domain Description: GIIM Note: maturase Location: 23939-24137 bp Feature: domain Description: GIIM Note: maturase Location: 23939-241 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: UJXO01000009.1 Klebsiella pneumoniae strain EuSCAPE_TR254 genome assembly, contig: 19646_378SCcontig000009, whole genome shotgun sequence (252354 bp)
Overview 1 RT 1: 69280-75571 bp Neighborhood of RT #1 [69280, 76167] COG5301 RVT-UG15 COG3499 tape_meas_TP901 COG5283 Feature: gene Location: 69280-69492 bp Feature: gene Location: 69492-70589 bp Ori: SXB71378.1 Feature: domain Description: COG5301 Location: 69513-69978 bp Feature: domain Description: COG5301 Location: 69513-69978 bp Feature: gene Location: 70782-72392 bp Ori: SXB71379.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 71190-71613 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 71190-71613 bp Feature: gene Location: 72685-73176 bp Ori: SXB71380.1 Feature: domain Description: COG3499 Location: 72688-73120 bp Feature: domain Description: COG3499 Location: 72 688-7312 0 bp Feature: gene Location: 73192-76167 bp Ori: SXB71381.1 Feature: domain Description: tape_meas_TP901 Location: 73759-74806 bp Feature: domain Description: tape_meas_TP901 Location: 73759-74806 bp Feature: domain Description: COG5283 Location: 75136-75571 bp Feature: domain Description: COG52 83 Location: 75136-75571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5301 (Phage-related tail fibre protein ), RVT-UG15, COG3499 (Phage protein U ), tape_meas_TP901 (TIGR01760), COG5283 (Phage-related tail protein )