myRT

myRT report for GCA_900509205.1_17870_5_47

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Seq: UJYH01000024.1 Klebsiella quasipneumoniae strain EuSCAPE_FR021 genome assembly, contig: 17870_547SCcontig000024, whole genome shotgun sequence (28950 bp)
Overview 1 RT 1: 15482-20957 bp Neighborhood of RT #1 [15482, 20962] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 15482-16153 bp Ori: SXC83205.1 Feature: domain Description: Plasmid_stab_B Location: 15497-15704 bp Feature: domain Description: Plasmid_stab_B Location: 1 5497-1 5704 bp Feature: domain Description: Plasmid_stab_B Location: 15809-16016 bp Feature: domain Description: Plasmid_stab_B Location: 1 5809-1 601 6 bp Feature: gene Location: 16156-17127 bp Ori: SXC83208.1 Gene: stbA Feature: domain Description: StbA Location: 16159-17104 bp Feature: domain Description: StbA Location: 1 61 59-1 71 04 bp Feature: gene Location: 17376-18860 bp Ori: SXC83210.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17778-18468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7778-1 8468 bp Feature: gene Location: 19266-19691 bp Ori: SXC83215.1 Gene: umuD_2 Feature: domain Description: PRK10276 Location: 19269-19677 bp Feature: domain Description: PRK1 0276 Location: 1 9269-1 9677 bp Feature: gene Location: 19691-20962 bp Ori: SXC83218.1 Gene: umuC_2 Feature: domain Description: umuC Location: 19694-20957 bp Feature: domain Description: umuC Location: 1 9694-20957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: UJYH01000001.1 Klebsiella quasipneumoniae strain EuSCAPE_FR021 genome assembly, contig: 17870_547SCcontig000001, whole genome shotgun sequence (843437 bp)
Overview 1 RT 1: 647807-655044 bp Neighborhood of RT #1 [647807, 655205] DapA RVT-Retrons TIR_2 Peptidase_S74 Feature: gene Location: 647807-648688 bp Ori: SXC68772.1 Gene: dapA_1 Feature: domain Description: DapA Location: 647810-648677 bp Feature: domain Description: DapA Location: 647810-648677 bp Feature: gene Location: 650418-651155 bp Feature: gene Location: 651289-652920 bp Ori: SXC68774.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 651604-652198 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 651604-652 198 bp Feature: domain Description: TIR_2 Location: 652525-652804 bp Feature: domain Description: TIR_2 Location: 652 52 5-652 804 bp Feature: gene Location: 653633-653872 bp Feature: gene Location: 653976-655205 bp Ori: SXC68776.1 Feature: domain Description: Peptidase_S74 Location: 654903-655044 bp Feature: domain Description: Peptidase_S74 Location: 654903-655044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DapA (COG0329), RVT-Retrons, TIR_2 (pfam13676), Peptidase_S74 (pfam13884)

Seq: UJYH01000020.1 Klebsiella quasipneumoniae strain EuSCAPE_FR021 genome assembly, contig: 17870_547SCcontig000020, whole genome shotgun sequence (49430 bp)
Overview 1 RT 1: 37097-42185 bp Neighborhood of RT #1 [37097, 42185] PRK10597 RVT-UG17 SLATT_5 Feature: gene Location: 37097-37330 bp Ori: SXC82062.1 Gene: dinI_3 Feature: domain Description: PRK10597 Location: 37100-37325 bp Feature: domain Description: PRK10597 Location: 3 7100-3 73 25 bp Feature: gene Location: 38055-38387 bp Feature: gene Location: 38761-40131 bp Ori: SXC82064.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 38989-39595 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3 8989-3 9595 bp Feature: gene Location: 40121-40660 bp Ori: SXC82065.1 Feature: domain Description: SLATT_5 Location: 40127-40640 bp Feature: domain Description: SLATT_5 Location: 40127-40640 bp Feature: gene Location: 41505-42185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), RVT-UG17, SLATT_5 (pfam18160)