myRT

myRT report for GCA_900509255.1_18174_5_113

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Seq: UJYO01000016.1 Klebsiella quasipneumoniae strain EuSCAPE_IT035 genome assembly, contig: 18174_5113SCcontig000016, whole genome shotgun sequence (74276 bp)
Overview 1 RT 1: 66273-69457 bp Neighborhood of RT #1 [66273, 69457] PRK10276 RVT-GII Feature: gene Location: 66273-66698 bp Feature: domain Description: PRK10276 Location: 66276-66684 bp Feature: domain Description: PRK1 0276 Location: 66276-66684 bp Feature: gene Location: 66816-67049 bp Feature: gene Location: 67100-68611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67505-68219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67505-6821 9 bp Feature: gene Location: 68845-69075 bp Feature: gene Location: 69134-69457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: UJYO01000018.1 Klebsiella quasipneumoniae strain EuSCAPE_IT035 genome assembly, contig: 18174_5113SCcontig000018, whole genome shotgun sequence (40685 bp)
Overview 1 RT 1: 814-12526 bp Neighborhood of RT #1 [814, 12645] Lhr GerD RVT-UG1 DEXXQc_Upf1-like DEXXQc_Upf1-like SF1_C_Upf1 PRK09692 Feature: gene Location: 814-3012 bp Feature: domain Description: Lhr Location: 820-2557 bp Feature: domain Description: Lhr Location: 82 0-2 557 bp Feature: gene Location: 3345-3761 bp Feature: domain Description: GerD Location: 3423-3537 bp Feature: domain Description: GerD Location: 342 3-3537 bp Feature: gene Location: 3770-7459 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4382-4892 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4382 -4892 bp Feature: gene Location: 8311-11940 bp Feature: domain Description: DEXXQc_Upf1-like Location: 9541-9850 bp Feature: domain Description: DEXXQc_Upf1-like Location: 9541-9850 bp Feature: domain Description: DEXXQc_Upf1-like Location: 11017-11218 bp Feature: domain Description: DEXXQc_Upf1-like Location: 11017-112 18 bp Feature: domain Description: SF1_C_Upf1 Location: 11398-11887 bp Feature: domain Description: SF1_C_Upf1 Location: 11398-11887 bp Feature: gene Location: 11965-12645 bp Feature: domain Description: PRK09692 Location: 11968-12526 bp Feature: domain Description: PRK09692 Location: 11968-12 52 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lhr (COG1201), GerD (pfam17898), RVT-UG1, DEXXQc_Upf1-like (cd17934), SF1_C_Upf1 (cd18808), PRK09692 (Integrase; provisional)