myRT

myRT report for GCA_900509405.2_18174_4_149

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Seq: UJYZ02000057.1 Klebsiella quasivariicola strain EuSCAPE_IL010 genome assembly, contig: 18174_4149SCcontig000057, whole genome shotgun sequence (14742 bp)
Overview 1 RT 1: 374-3086 bp Neighborhood of RT #1 [374, 3103] HTH_23 HTH_33 DDE_3 RVT-GII PHA02517 Feature: gene Location: 374-706 bp Feature: gene Location: 668-1657 bp Feature: domain Description: HTH_23 Location: 710-845 bp Feature: domain Description: HTH_23 Location: 71 0-845 bp Feature: domain Description: HTH_33 Location: 950-1097 bp Feature: domain Description: HTH_33 Location: 950-1 097 bp Feature: domain Description: DDE_3 Location: 1157-1574 bp Feature: domain Description: DDE_3 Location: 1 1 57-1 574 bp Feature: gene Location: 1673-2140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1946-2129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 946-21 29 bp Feature: gene Location: 2555-2710 bp Feature: gene Location: 2783-3103 bp Feature: domain Description: PHA02517 Location: 2816-3086 bp Feature: domain Description: PHA0251 7 Location: 281 6-3086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), HTH_23 (pfam13384), HTH_33 (pfam13592), DDE_3 (pfam13358)

Seq: UJYZ02000079.1 Klebsiella quasivariicola strain EuSCAPE_IL010 genome assembly, contig: 18174_4149SCcontig000079, whole genome shotgun sequence (4876 bp)
Overview 1 RT 1: 24-1997 bp Neighborhood of RT #1 [24, 2002] RVT-GII GIIM PHA02517 IS5 Feature: gene Location: 24-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-597 bp Feature: domain Description: GIIM Note: maturase Location: 669-870 bp Feature: domain Description: GIIM Note: maturase Location: 669-870 bp Feature: gene Location: 1244-1663 bp Feature: domain Description: PHA02517 Location: 1247-1658 bp Feature: domain Description: PHA02 517 Location: 12 47-1658 bp Feature: gene Location: 1682-2002 bp Feature: domain Description: IS5 Location: 1697-1997 bp Feature: domain Description: IS5 Location: 1697-1997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), IS5 (COG3039), RVT-GII, GIIM (pfam08388)

Seq: UJYZ02000098.1 Klebsiella quasivariicola strain EuSCAPE_IL010 genome assembly, contig: 18174_4149SCcontig000098, whole genome shotgun sequence (1913 bp)
Overview 1 RT 1: 59-1912 bp Neighborhood of RT #1 [59, 1912] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII