myRT

myRT report for GCA_900509505.2_18174_4_87

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Seq: UJZL02000014.1 Klebsiella variicola strain EuSCAPE_DE087 genome assembly, contig: 18174_487SCcontig000014, whole genome shotgun sequence (38281 bp)
Overview 1 RT 1: 25664-28728 bp Neighborhood of RT #1 [25664, 28745] PRK10724 SmpB RVT-UG11 PRK09678 Feature: gene Location: 25664-26101 bp Ori: VVL18850.1 Gene: ratA Feature: domain Description: PRK10724 Location: 25667-26096 bp Feature: domain Description: PRK1 0724 Location: 25667-26096 bp Feature: gene Location: 26251-26733 bp Ori: VVL18857.1 Gene: smpB Feature: domain Description: SmpB Location: 26281-26725 bp Feature: domain Description: SmpB Location: 26281 -26725 bp Feature: gene Location: 27349-28122 bp Ori: VVL18864.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27484-27937 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 27484-27937 bp Feature: gene Location: 28091-28264 bp Feature: gene Location: 28527-28745 bp Ori: VVL18879.1 Feature: domain Description: PRK09678 Location: 28530-28728 bp Feature: domain Description: PRK09678 Location: 28530-28728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: UJZL02000008.1 Klebsiella variicola strain EuSCAPE_DE087 genome assembly, contig: 18174_487SCcontig000008, whole genome shotgun sequence (234464 bp)
Overview 1 RT 1: 215294-220023 bp Neighborhood of RT #1 [215294, 220094] Phage_ASH RVT-Retrons Tra5 HTH_Tnp_1 Feature: gene Location: 215294-215626 bp Ori: VVL10484.1 Feature: domain Description: Phage_ASH Location: 215297-215468 bp Feature: domain Description: Phage_ASH Location: 2 152 97-2 15468 bp Feature: gene Location: 215623-215850 bp Feature: gene Location: 216627-218333 bp Ori: VVL10519.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 216777-217374 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 16777-2 17374 bp Feature: gene Location: 218984-219688 bp Ori: VVL10537.1 Feature: domain Description: Tra5 Location: 219005-219647 bp Feature: domain Description: Tra5 Location: 2 19005-2 19647 bp Feature: gene Location: 219810-220094 bp Ori: VVL10557.1 Feature: domain Description: HTH_Tnp_1 Location: 219816-220023 bp Feature: domain Description: HTH_Tnp_1 Location: 2 19816-2 2 002 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_ASH (pfam10554), RVT-Retrons, Tra5 (COG2801), HTH_Tnp_1 (pfam01527)

Seq: UJZL02000001.1 Klebsiella variicola strain EuSCAPE_DE087 genome assembly, contig: 18174_487SCcontig000001, whole genome shotgun sequence (2147954 bp)
Overview 1 RT 1: 57026-64906 bp Neighborhood of RT #1 [57026, 64941] PRK09678 RVT-UG8 RVT-UG3 PRK09692 proA Feature: gene Location: 57026-57298 bp Ori: VVK34502.1 Feature: domain Description: PRK09678 Location: 57035-57209 bp Feature: domain Description: PRK09678 Location: 5703 5-57209 bp Feature: gene Location: 57318-58130 bp Feature: gene Location: 58737-60698 bp Ori: VVK34531.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 59256-59700 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 59256-59700 bp Feature: gene Location: 60695-61978 bp Ori: VVK34543.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 60983-61490 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 60983 -61490 bp Feature: gene Location: 62147-63334 bp Ori: VVK34557.1 Gene: intS_1 Feature: domain Description: PRK09692 Location: 62153-63305 bp Feature: domain Description: PRK09692 Location: 62153 -63 3 05 bp Feature: gene Location: 63688-64941 bp Ori: VVK34571.1 Gene: proA_1 Feature: domain Description: proA Location: 63715-64906 bp Feature: domain Description: proA Location: 63 715-64906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional), proA (TIGR00407)

Seq: UJZL02000007.1 Klebsiella variicola strain EuSCAPE_DE087 genome assembly, contig: 18174_487SCcontig000007, whole genome shotgun sequence (280310 bp)
Overview 1 RT 1: 46241-51608 bp Neighborhood of RT #1 [46241, 51608] RepL RVT-AbiP2 PRK10947 Feature: gene Location: 46241-46999 bp Feature: gene Location: 48286-48831 bp Ori: VVL03420.1 Feature: domain Description: RepL Location: 48409-48781 bp Feature: domain Description: RepL Location: 4 84 09-4 8781 bp Feature: gene Location: 49187-50731 bp Ori: VVL03437.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 49616-50075 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 4 9616-50075 bp Feature: gene Location: 50928-51188 bp Ori: VVL03453.1 Feature: domain Description: PRK10947 Location: 50943-51165 bp Feature: domain Description: PRK1094 7 Location: 5094 3-51165 bp Feature: gene Location: 51258-51608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RepL (pfam05732), RVT-AbiP2, PRK10947 (DNA-binding transcriptional regulator H-NS)