myRT

myRT report for GCA_900510155.1_17870_2_35

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Seq: UKBZ01000010.1 Klebsiella pneumoniae strain EuSCAPE_PL013 genome assembly, contig: 17870_235SCcontig000010, whole genome shotgun sequence (125400 bp)
Overview 1 RT 1: 32873-40047 bp Neighborhood of RT #1 [32873, 40064] EAL RVT-UG4 FimD FimC Feature: gene Location: 32873-33079 bp Feature: gene Location: 33169-34023 bp Feature: domain Description: EAL Location: 33853-34006 bp Feature: domain Description: EAL Location: 33853-34006 bp Feature: gene Location: 34665-36695 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 35073-35517 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 35073-3551 7 bp Feature: gene Location: 36695-39304 bp Feature: domain Description: FimD Location: 36752-39293 bp Feature: domain Description: FimD Location: 36752-39293 bp Feature: gene Location: 39336-40064 bp Feature: domain Description: FimC Location: 39369-40047 bp Feature: domain Description: FimC Location: 39369-40047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: UKBZ01000014.1 Klebsiella pneumoniae strain EuSCAPE_PL013 genome assembly, contig: 17870_235SCcontig000014, whole genome shotgun sequence (89047 bp)
Overview 1 RT 1: 27496-30581 bp Neighborhood of RT #1 [27496, 30581] AfaD-like zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII Feature: gene Location: 27496-27945 bp Feature: domain Description: AfaD-like Location: 27592-27931 bp Feature: domain Description: AfaD-like Location: 2 7592 -2 7931 bp Feature: gene Location: 28063-29040 bp Feature: domain Description: zf-ISL3 Location: 28195-28321 bp Feature: domain Description: zf-ISL3 Location: 2 8195-2 832 1 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 28339-28486 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 2 8339-2 8486 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 28537-29011 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2 8537-2 9011 bp Feature: gene Location: 29080-29760 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 29086-29242 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2 9086-2 92 42 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29620-29758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 962 0-2 9758 bp Feature: gene Location: 29950-30312 bp Feature: gene Location: 30447-30581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AfaD-like (cd18776), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT-GII