myRT

myRT report for GCA_900510395.1_17870_2_65

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Seq: UKCX01000004.1 Klebsiella pneumoniae strain EuSCAPE_FR013 genome assembly, contig: 17870_265SCcontig000004, whole genome shotgun sequence (434036 bp)
Overview 1 RT 1: 405349-408424 bp Neighborhood of RT #1 [405349, 408429] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 405349-405567 bp Ori: SXI78316.1 Feature: domain Description: PRK09678 Location: 405352-405550 bp Feature: domain Description: PRK09678 Location: 405352-405550 bp Feature: gene Location: 405829-406002 bp Feature: gene Location: 405971-406744 bp Ori: SXI78318.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 406106-406559 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 4061 06-406559 bp Feature: gene Location: 407360-407842 bp Ori: SXI78319.1 Gene: smpB Feature: domain Description: SmpB Location: 407390-407834 bp Feature: domain Description: SmpB Location: 407390-407834 bp Feature: gene Location: 407992-408429 bp Ori: SXI78320.1 Gene: ratA Feature: domain Description: PRK10724 Location: 407995-408424 bp Feature: domain Description: PRK1 0724 Location: 407995-408424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: UKCX01000023.1 Klebsiella pneumoniae strain EuSCAPE_FR013 genome assembly, contig: 17870_265SCcontig000023, whole genome shotgun sequence (37967 bp)
Overview 1 RT 1: 5198-11310 bp Neighborhood of RT #1 [5198, 11310] PRK15235 zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII Feature: gene Location: 5198-7645 bp Ori: SXI84699.1 Gene: lpfC Feature: domain Description: PRK15235 Location: 5204-7643 bp Feature: domain Description: PRK152 35 Location: 52 04-7643 bp Feature: gene Location: 8209-9186 bp Ori: SXI84700.1 Feature: domain Description: zf-ISL3 Location: 8341-8467 bp Feature: domain Description: zf-ISL3 Location: 8341-8467 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 8485-8632 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 8485-8632 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 8683-9157 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 8683-9157 bp Feature: gene Location: 9187-9906 bp Ori: SXI84701.1 Gene: ltrA Feature: domain Description: DDE_Tnp_ISL3 Location: 9193-9388 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 9193-9388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9766-9904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9766-9904 bp Feature: gene Location: 9987-10172 bp Feature: gene Location: 11080-11310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15235 (outer membrane fimbrial usher protein SefC; Provisional), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT-GII