myRT

myRT report for GCA_900510645.1_17870_3_16

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Seq: UKDV01000070.1 Klebsiella pneumoniae strain EuSCAPE_SK007 genome assembly, contig: 17870_316SCcontig000070, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1 1 56 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: UKDV01000027.1 Klebsiella pneumoniae strain EuSCAPE_SK007 genome assembly, contig: 17870_316SCcontig000027, whole genome shotgun sequence (38628 bp)
Overview 1 RT 1: 31990-38432 bp Neighborhood of RT #1 [31990, 38449] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31990-32655 bp Feature: domain Description: INT_P4_C Location: 32095-32653 bp Feature: domain Description: INT_P4_C Location: 32 095-32 653 bp Feature: gene Location: 32916-33356 bp Feature: domain Description: Integrase_1 Location: 32922-33138 bp Feature: domain Description: Integrase_1 Location: 32 92 2 -33138 bp Feature: gene Location: 33413-35491 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33821-34265 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3382 1-342 65 bp Feature: gene Location: 35491-38100 bp Feature: domain Description: FimD Location: 35548-38089 bp Feature: domain Description: FimD Location: 35548-38089 bp Feature: gene Location: 38132-38449 bp Feature: domain Description: FimC Location: 38135-38432 bp Feature: domain Description: FimC Location: 38135-38432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)