myRT

myRT report for GCA_900510845.1_17870_3_35

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Seq: UKER01000036.1 Klebsiella pneumoniae strain EuSCAPE_SK034 genome assembly, contig: 17870_335SCcontig000036, whole genome shotgun sequence (28629 bp)
Overview 1 RT 1: 2-3017 bp Neighborhood of RT #1 [2, 3022] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 2-160 bp Feature: domain Description: PRK09678 Location: 11-143 bp Feature: domain Description: PRK09678 Location: 1 1 -1 43 bp Feature: gene Location: 407-595 bp Feature: gene Location: 1038-1337 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1041-1152 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 041 -1 1 52 bp Feature: gene Location: 1953-2435 bp Feature: domain Description: SmpB Location: 1983-2427 bp Feature: domain Description: SmpB Location: 1 983-2427 bp Feature: gene Location: 2546-3022 bp Feature: domain Description: PRK10724 Location: 2552-3017 bp Feature: domain Description: PRK1 0724 Location: 2552-301 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: UKER01000071.1 Klebsiella pneumoniae strain EuSCAPE_SK034 genome assembly, contig: 17870_335SCcontig000071, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: UKER01000051.1 Klebsiella pneumoniae strain EuSCAPE_SK034 genome assembly, contig: 17870_335SCcontig000051, whole genome shotgun sequence (10660 bp)
Overview 1 RT 1: 743-4836 bp Neighborhood of RT #1 [743, 4901] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 743-1819 bp Feature: domain Description: COG3547 Location: 782-1703 bp Feature: domain Description: COG3 547 Location: 782-1703 bp Feature: gene Location: 2068-2274 bp Feature: gene Location: 2361-3884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2634-3366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263 4-3 3 66 bp Feature: domain Description: GIIM Note: maturase Location: 3441-3639 bp Feature: domain Description: GIIM Note: maturase Location: 3 441-3 63 9 bp Feature: gene Location: 3838-4263 bp Feature: gene Location: 4476-4901 bp Feature: domain Description: PHA02517 Location: 4500-4836 bp Feature: domain Description: PHA02517 Location: 4500-483 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)