myRT

myRT report for GCA_900511085.1_17870_3_60

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Seq: UKFL01000019.1 Klebsiella pneumoniae strain EuSCAPE_CZ021 genome assembly, contig: 17870_360SCcontig000019, whole genome shotgun sequence (52420 bp)
Overview 1 RT 1: 1803-6313 bp Neighborhood of RT #1 [1803, 6321] Zn_Tnp_IS91 Y2_Tnp RVT-GII HTH_Tnp_1 glmM Feature: gene Location: 1803-3332 bp Ori: SXM38505.1 Feature: domain Description: Zn_Tnp_IS91 Location: 1890-2172 bp Feature: domain Description: Zn_Tnp_IS91 Location: 1 890-21 72 bp Feature: domain Description: Y2_Tnp Location: 2307-2979 bp Feature: domain Description: Y2_Tnp Location: 2307-2979 bp Feature: gene Location: 3733-5217 bp Ori: SXM38507.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4135-4825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 35-4825 bp Feature: gene Location: 5618-5779 bp Ori: SXM38508.1 Feature: domain Description: HTH_Tnp_1 Location: 5627-5771 bp Feature: domain Description: HTH_Tnp_1 Location: 5627-5771 bp Feature: gene Location: 6202-6321 bp Ori: SXM38509.1 Gene: glmM_2 Feature: domain Description: glmM Location: 6205-6313 bp Feature: domain Description: glmM Location: 6205-631 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), RVT-GII, HTH_Tnp_1 (pfam01527), glmM (TIGR01455)

Seq: UKFL01000013.1 Klebsiella pneumoniae strain EuSCAPE_CZ021 genome assembly, contig: 17870_360SCcontig000013, whole genome shotgun sequence (102304 bp)
Overview 1 RT 1: 60229-65201 bp Neighborhood of RT #1 [60229, 65206] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu PRK00872 Feature: gene Location: 60229-61023 bp Ori: SXM37430.1 Gene: intS_4 Feature: domain Description: PRK09692 Location: 60238-60601 bp Feature: domain Description: PRK09692 Location: 602 38-60601 bp Feature: domain Description: PRK09692 Location: 60616-60994 bp Feature: domain Description: PRK09692 Location: 60616-60994 bp Feature: gene Location: 61255-61896 bp Ori: SXM37432.1 Feature: domain Description: SLATT_5 Location: 61258-61861 bp Feature: domain Description: SLATT_5 Location: 612 58-61861 bp Feature: gene Location: 62091-63500 bp Ori: SXM37433.1 Gene: ltrA_2 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 62328-62940 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 62 32 8-62 940 bp Feature: gene Location: 64197-64376 bp Ori: SXM37434.1 Feature: domain Description: Psu Location: 64215-64374 bp Feature: domain Description: Psu Location: 642 15-64374 bp Feature: gene Location: 64739-65206 bp Ori: SXM37435.1 Feature: domain Description: PRK00872 Location: 64745-65201 bp Feature: domain Description: PRK00872 Location: 64745-652 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK00872 (hypothetical protein; Provisional)

Seq: UKFL01000027.1 Klebsiella pneumoniae strain EuSCAPE_CZ021 genome assembly, contig: 17870_360SCcontig000027, whole genome shotgun sequence (26015 bp)
Overview 1 RT 1: 10202-15193 bp Neighborhood of RT #1 [10202, 15198] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 10202-10627 bp Ori: SXM38861.1 Feature: domain Description: Antirestrict Location: 10337-10625 bp Feature: domain Description: Antirestrict Location: 103 3 7-10625 bp Feature: gene Location: 11148-11378 bp Feature: gene Location: 11612-13096 bp Ori: SXM38863.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12014-12704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12014-12704 bp Feature: gene Location: 13502-13927 bp Ori: SXM38864.1 Gene: umuD_2 Feature: domain Description: PRK10276 Location: 13505-13913 bp Feature: domain Description: PRK10276 Location: 13 505-13 913 bp Feature: gene Location: 13927-15198 bp Ori: SXM38865.1 Gene: umuC_2 Feature: domain Description: umuC Location: 13930-15193 bp Feature: domain Description: umuC Location: 13 93 0-15193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: UKFL01000010.1 Klebsiella pneumoniae strain EuSCAPE_CZ021 genome assembly, contig: 17870_360SCcontig000010, whole genome shotgun sequence (220575 bp)
Overview 1 RT 1: 27323-30640 bp Neighborhood of RT #1 [27323, 30663] GlxI_Ni IS5 RVT-GII GIIM IS5 Feature: gene Location: 27323-27718 bp Ori: SXM36093.1 Gene: gloA_2 Feature: domain Description: GlxI_Ni Location: 27332-27695 bp Feature: domain Description: GlxI_Ni Location: 27332-27695 bp Feature: gene Location: 28015-28365 bp Ori: SXM36094.1 Feature: domain Description: IS5 Location: 28087-28339 bp Feature: domain Description: IS5 Location: 28087-28339 bp Feature: gene Location: 28376-29629 bp Ori: SXM36095.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28589-29246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28589-2924 6 bp Feature: domain Description: GIIM Note: maturase Location: 29324-29546 bp Feature: domain Description: GIIM Note: maturase Location: 29324 -2954 6 bp Feature: gene Location: 29841-29978 bp Feature: gene Location: 30124-30663 bp Ori: SXM36098.1 Feature: domain Description: IS5 Location: 30313-30640 bp Feature: domain Description: IS5 Location: 30313-3064 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlxI_Ni (cd16358), IS5 (COG3039), RVT-GII, GIIM (pfam08388)