myRT

myRT report for GCA_900511205.1_17870_3_8

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Seq: UKGA01000036.1 Klebsiella pneumoniae strain EuSCAPE_FR073 genome assembly, contig: 17870_38SCcontig000036, whole genome shotgun sequence (22074 bp)
Overview 1 RT 1: 60-2828 bp Neighborhood of RT #1 [60, 2893] RVT-GII GIIM PHA02517 Feature: gene Location: 60-266 bp Feature: gene Location: 353-1876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 626-1358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 626-1 358 bp Feature: domain Description: GIIM Note: maturase Location: 1433-1631 bp Feature: domain Description: GIIM Note: maturase Location: 1 433-1 631 bp Feature: gene Location: 1830-2255 bp Feature: gene Location: 2468-2893 bp Feature: domain Description: PHA02517 Location: 2489-2828 bp Feature: domain Description: PHA0251 7 Location: 2489-2828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: UKGA01000034.1 Klebsiella pneumoniae strain EuSCAPE_FR073 genome assembly, contig: 17870_38SCcontig000034, whole genome shotgun sequence (23030 bp)
Overview 1 RT 1: 8593-13936 bp Neighborhood of RT #1 [8593, 14073] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 8593-9864 bp Feature: domain Description: umuC Location: 8596-9859 bp Feature: domain Description: umuC Location: 8596-9859 bp Feature: gene Location: 9864-10538 bp Feature: domain Description: PRK10276 Location: 10116-10524 bp Feature: domain Description: PRK102 76 Location: 10116-1052 4 bp Feature: gene Location: 10692-12179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11097-11787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11097-11787 bp Feature: gene Location: 12428-13399 bp Feature: domain Description: StbA Location: 12431-13376 bp Feature: domain Description: StbA Location: 12 431-13376 bp Feature: gene Location: 13402-14073 bp Feature: domain Description: Plasmid_stab_B Location: 13417-13624 bp Feature: domain Description: Plasmid_stab_B Location: 13417-1362 4 bp Feature: domain Description: Plasmid_stab_B Location: 13729-13936 bp Feature: domain Description: Plasmid_stab_B Location: 1372 9-13936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: UKGA01000011.1 Klebsiella pneumoniae strain EuSCAPE_FR073 genome assembly, contig: 17870_38SCcontig000011, whole genome shotgun sequence (185465 bp)
Overview 1 RT 1: 17229-21231 bp Neighborhood of RT #1 [17229, 23255] RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like PRK04247 RVT-UG5 Feature: gene Location: 17229-18947 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 17556-18090 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 17556-18090 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 18540-18918 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 18540-18918 bp Feature: gene Location: 18958-20058 bp Feature: domain Description: PRK04247 Location: 19021-19252 bp Feature: domain Description: PRK04247 Location: 19021-19252 bp Feature: gene Location: 20238-23255 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 20736-21231 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2073 6-2123 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like (cd17293), PRK04247 (endonuclease NucS), RVT-UG5