myRT

myRT report for GCA_900511325.1_17870_4_14

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Seq: UKGN01000025.1 Klebsiella pneumoniae strain EuSCAPE_CZ022 genome assembly, contig: 17870_414SCcontig000025, whole genome shotgun sequence (67630 bp)
Overview 1 RT 1: 8196-13539 bp Neighborhood of RT #1 [8196, 13676] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 8196-9467 bp Feature: domain Description: umuC Location: 8199-9462 bp Feature: domain Description: umuC Location: 81 99-9462 bp Feature: gene Location: 9467-10270 bp Feature: domain Description: PRK10276 Location: 9848-10256 bp Feature: domain Description: PRK1 0276 Location: 9848-1 0256 bp Feature: gene Location: 10295-11782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10700-11390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0700-1 1 390 bp Feature: gene Location: 12031-13002 bp Feature: domain Description: StbA Location: 12034-12979 bp Feature: domain Description: StbA Location: 1 2034-1 2979 bp Feature: gene Location: 13005-13676 bp Feature: domain Description: Plasmid_stab_B Location: 13020-13227 bp Feature: domain Description: Plasmid_stab_B Location: 1 3020-1 3227 bp Feature: domain Description: Plasmid_stab_B Location: 13332-13539 bp Feature: domain Description: Plasmid_stab_B Location: 1 3332-1 3539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: UKGN01000015.1 Klebsiella pneumoniae strain EuSCAPE_CZ022 genome assembly, contig: 17870_414SCcontig000015, whole genome shotgun sequence (128076 bp)
Overview 1 RT 1: 45258-52432 bp Neighborhood of RT #1 [45258, 52449] EAL RVT-UG4 FimD FimC Feature: gene Location: 45258-45464 bp Feature: gene Location: 45554-46408 bp Feature: domain Description: EAL Location: 46238-46391 bp Feature: domain Description: EAL Location: 462 38-46391 bp Feature: gene Location: 47050-49080 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47458-47902 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47458-47902 bp Feature: gene Location: 49080-51689 bp Feature: domain Description: FimD Location: 49137-51678 bp Feature: domain Description: FimD Location: 49137-51678 bp Feature: gene Location: 51721-52449 bp Feature: domain Description: FimC Location: 51769-52432 bp Feature: domain Description: FimC Location: 51769-52 432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)