myRT

myRT report for GCA_900511505.1_17870_5_36

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Seq: UKHD01000021.1 Klebsiella pneumoniae strain EuSCAPE_PL056 genome assembly, contig: 17870_536SCcontig000021, whole genome shotgun sequence (18795 bp)
Overview 1 RT 1: 4063-8499 bp Neighborhood of RT #1 [4063, 8507] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 4063-4440 bp Ori: SXO95367.1 Feature: domain Description: DDE_Tnp_IS1 Location: 4066-4438 bp Feature: domain Description: DDE_Tnp_IS1 Location: 4066-4438 bp Feature: gene Location: 4485-4760 bp Ori: SXO95368.1 Feature: domain Description: InsA Location: 4491-4752 bp Feature: domain Description: InsA Location: 4491 -4752 bp Feature: gene Location: 4912-6396 bp Ori: SXO95369.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5314-6004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 531 4-6004 bp Feature: gene Location: 6805-7236 bp Ori: SXO95370.1 Gene: umuD_3 Feature: domain Description: PRK10276 Location: 6856-7219 bp Feature: domain Description: PRK1 0276 Location: 6856-721 9 bp Feature: gene Location: 7236-8507 bp Ori: SXO95371.1 Gene: umuC_3 Feature: domain Description: umuC Location: 7239-8499 bp Feature: domain Description: umuC Location: 7239-8499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: UKHD01000005.1 Klebsiella pneumoniae strain EuSCAPE_PL056 genome assembly, contig: 17870_536SCcontig000005, whole genome shotgun sequence (295757 bp)
Overview 1 RT 1: 154725-157785 bp Neighborhood of RT #1 [154725, 157785] DinI RVT-Retrons Feature: gene Location: 154725-155165 bp Ori: SXO89816.1 Gene: dinI_3 Feature: domain Description: DinI Location: 154980-155163 bp Feature: domain Description: DinI Location: 154980-155163 bp Feature: gene Location: 155594-155749 bp Feature: gene Location: 156072-157022 bp Ori: SXO89822.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 156252-156795 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1562 52 -156795 bp Feature: gene Location: 157092-157451 bp Feature: gene Location: 157591-157785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons

Seq: UKHD01000001.1 Klebsiella pneumoniae strain EuSCAPE_PL056 genome assembly, contig: 17870_536SCcontig000001, whole genome shotgun sequence (1793331 bp)
Overview 1 RT 1: 1642216-1647517 bp Neighborhood of RT #1 [1642216, 1647522] PRK15110 PRK09951 RVT-UG11 umuC PRK10276 Feature: gene Location: 1642216-1643181 bp Ori: SXO75574.1 Gene: sapB_2 Feature: domain Description: PRK15110 Location: 1642219-1643179 bp Feature: domain Description: PRK15110 Location: 1642219-1643 179 bp Feature: gene Location: 1643386-1644054 bp Ori: SXO75576.1 Gene: yedK_2 Feature: domain Description: PRK09951 Location: 1643389-1644052 bp Feature: domain Description: PRK09951 Location: 1643 3 89-1644052 bp Feature: gene Location: 1644255-1645163 bp Ori: SXO75578.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1644528-1644984 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1644528-1644984 bp Feature: gene Location: 1645836-1647101 bp Ori: SXO75580.1 Gene: umuC_1 Feature: domain Description: umuC Location: 1645839-1647099 bp Feature: domain Description: umuC Location: 164583 9-1647099 bp Feature: gene Location: 1647103-1647522 bp Ori: SXO75582.1 Gene: umuD_1 Feature: domain Description: PRK10276 Location: 1647106-1647517 bp Feature: domain Description: PRK10276 Location: 1647106-1647517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)