myRT

myRT report for GCA_900511515.1_17870_5_31

Download annotations/find similar RTs

Seq: UKHJ01000041.1 Klebsiella pneumoniae strain EuSCAPE_PL042 genome assembly, contig: 17870_531SCcontig000041, whole genome shotgun sequence (18373 bp)
Overview 1 RT 1: 4768-9790 bp Neighborhood of RT #1 [4768, 9798] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 4768-5733 bp Feature: domain Description: ArdC Location: 4894-5728 bp Feature: domain Description: ArdC Location: 4894-5728 bp Feature: gene Location: 5865-6134 bp Feature: gene Location: 6203-7690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6608-7298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6608-7298 bp Feature: gene Location: 7844-8527 bp Feature: domain Description: PRK10276 Location: 8147-8510 bp Feature: domain Description: PRK1 0276 Location: 81 47-851 0 bp Feature: gene Location: 8527-9798 bp Feature: domain Description: umuC Location: 8530-9790 bp Feature: domain Description: umuC Location: 8530-9790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: UKHJ01000037.1 Klebsiella pneumoniae strain EuSCAPE_PL042 genome assembly, contig: 17870_531SCcontig000037, whole genome shotgun sequence (28451 bp)
Overview 1 RT 1: 4720-7990 bp Neighborhood of RT #1 [4720, 8004] RVT-GII PRK10276 Feature: gene Location: 4720-4935 bp Feature: gene Location: 5202-5432 bp Feature: gene Location: 5666-7177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6785 bp Feature: gene Location: 7228-7461 bp Feature: gene Location: 7579-8004 bp Feature: domain Description: PRK10276 Location: 7582-7990 bp Feature: domain Description: PRK102 76 Location: 7582 -7990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UKHJ01000014.1 Klebsiella pneumoniae strain EuSCAPE_PL042 genome assembly, contig: 17870_531SCcontig000014, whole genome shotgun sequence (148544 bp)
Overview 1 RT 1: 109685-116553 bp Neighborhood of RT #1 [109685, 116555] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 109685-110413 bp Feature: domain Description: FimC Location: 109733-110396 bp Feature: domain Description: FimC Location: 10973 3 -1103 96 bp Feature: gene Location: 110445-113054 bp Feature: domain Description: FimD Location: 110502-113043 bp Feature: domain Description: FimD Location: 110502-113 043 bp Feature: gene Location: 113054-115132 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 113462-113906 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 113 462-113 906 bp Feature: gene Location: 115189-115629 bp Feature: domain Description: Integrase_1 Location: 115195-115411 bp Feature: domain Description: Integrase_1 Location: 115195-115411 bp Feature: gene Location: 115890-116555 bp Feature: domain Description: INT_P4_C Location: 115995-116553 bp Feature: domain Description: INT_P4_C Location: 115995-116553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)