myRT

myRT report for GCA_900511655.1_17870_5_53

Download annotations/find similar RTs

Seq: UKHS01000009.1 Klebsiella pneumoniae strain EuSCAPE_FR028 genome assembly, contig: 17870_553SCcontig000009, whole genome shotgun sequence (274217 bp)
Overview 1 RT 1: 221511-228379 bp Neighborhood of RT #1 [221511, 228381] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 221511-222239 bp Feature: domain Description: FimC Location: 221544-222222 bp Feature: domain Description: FimC Location: 221 544-222222 bp Feature: gene Location: 222271-224880 bp Feature: domain Description: FimD Location: 222328-224869 bp Feature: domain Description: FimD Location: 222328-224869 bp Feature: gene Location: 224880-226958 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225288-225732 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225288-225732 bp Feature: gene Location: 227015-227455 bp Feature: domain Description: Integrase_1 Location: 227021-227237 bp Feature: domain Description: Integrase_1 Location: 227021 -227237 bp Feature: gene Location: 227716-228381 bp Feature: domain Description: INT_P4_C Location: 227821-228379 bp Feature: domain Description: INT_P4_C Location: 227821 -228379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UKHS01000019.1 Klebsiella pneumoniae strain EuSCAPE_FR028 genome assembly, contig: 17870_553SCcontig000019, whole genome shotgun sequence (61656 bp)
Overview 1 RT 1: 49016-52286 bp Neighborhood of RT #1 [49016, 52300] RVT-GII PRK10276 Feature: gene Location: 49016-49231 bp Feature: gene Location: 49498-49728 bp Feature: gene Location: 49962-51473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: gene Location: 51524-51757 bp Feature: gene Location: 51875-52300 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Feature: domain Description: PRK102 76 Location: 51878-52 2 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)