myRT

myRT report for GCA_900511665.1_17870_5_63

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Seq: UKHU01000020.1 Klebsiella pneumoniae strain EuSCAPE_FR047 genome assembly, contig: 17870_563SCcontig000020, whole genome shotgun sequence (61653 bp)
Overview 1 RT 1: 49016-52286 bp Neighborhood of RT #1 [49016, 52300] RVT-GII PRK10276 Feature: gene Location: 49016-49231 bp Feature: gene Location: 49498-49728 bp Feature: gene Location: 49962-51473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51 081 bp Feature: gene Location: 51524-51757 bp Feature: gene Location: 51875-52300 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Feature: domain Description: PRK1 0276 Location: 51 878-52286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UKHU01000008.1 Klebsiella pneumoniae strain EuSCAPE_FR047 genome assembly, contig: 17870_563SCcontig000008, whole genome shotgun sequence (274223 bp)
Overview 1 RT 1: 221517-228385 bp Neighborhood of RT #1 [221517, 228387] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 221517-222245 bp Feature: domain Description: FimC Location: 221550-222228 bp Feature: domain Description: FimC Location: 2 2 1550-2 2 2 2 2 8 bp Feature: gene Location: 222277-224886 bp Feature: domain Description: FimD Location: 222334-224875 bp Feature: domain Description: FimD Location: 2 2 2 334-2 2 4875 bp Feature: gene Location: 224886-226964 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225294-225738 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 2 52 94-2 2 5738 bp Feature: gene Location: 227021-227461 bp Feature: domain Description: Integrase_1 Location: 227027-227243 bp Feature: domain Description: Integrase_1 Location: 2 2 702 7-2 2 72 43 bp Feature: gene Location: 227722-228387 bp Feature: domain Description: INT_P4_C Location: 227827-228385 bp Feature: domain Description: INT_P4_C Location: 2 2 782 7-2 2 8385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)