myRT

myRT report for GCA_900511675.1_17870_5_61

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Seq: UKHW01000003.1 Klebsiella pneumoniae strain EuSCAPE_FR045 genome assembly, contig: 17870_561SCcontig000003, whole genome shotgun sequence (777122 bp)
Overview 1 RT 1: 267495-274681 bp 2 RT 2: 727259-733987 bp Neighborhood of RT #1 [267495, 274681] FimC FimD RVT-UG4 EAL Neighborhood of RT #2 [727259, 734028] HTH_XRE RVT-Retrons COG3440 Feature: gene Location: 267495-268223 bp Feature: domain Description: FimC Location: 267543-268206 bp Feature: domain Description: FimC Location: 267543-268206 bp Feature: gene Location: 268255-270864 bp Feature: domain Description: FimD Location: 268312-270853 bp Feature: domain Description: FimD Location: 26831 2-270853 bp Feature: gene Location: 270864-272894 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 271272-271716 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 271 272-271 71 6 bp Feature: gene Location: 273531-274385 bp Feature: domain Description: EAL Location: 274215-274368 bp Feature: domain Description: EAL Location: 27421 5-274368 bp Feature: gene Location: 274475-274681 bp Feature: gene Location: 727259-727585 bp Feature: gene Location: 727637-727927 bp Feature: domain Description: HTH_XRE Location: 727649-727814 bp Feature: domain Description: HTH_XRE Location: 727649-72781 4 bp Feature: gene Location: 727962-728879 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 728058-728625 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 728058-728625 bp Feature: gene Location: 728920-732771 bp Feature: gene Location: 732970-734028 bp Feature: domain Description: COG3440 Location: 733600-733987 bp Feature: domain Description: COG3440 Location: 733600-733987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052), HTH_XRE (smart00530), RVT-Retrons, COG3440 (Predicted restriction endonuclease )