myRT

myRT report for GCA_900511715.1_17870_5_64

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Seq: UKHZ01000008.1 Klebsiella pneumoniae strain EuSCAPE_FR050 genome assembly, contig: 17870_564SCcontig000008, whole genome shotgun sequence (303661 bp)
Overview 1 RT 1: 264835-271703 bp Neighborhood of RT #1 [264835, 271705] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 264835-265563 bp Feature: domain Description: FimC Location: 264883-265546 bp Feature: domain Description: FimC Location: 264883-265546 bp Feature: gene Location: 265595-268204 bp Feature: domain Description: FimD Location: 265652-268193 bp Feature: domain Description: FimD Location: 265652-2681 93 bp Feature: gene Location: 268204-270282 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268612-269056 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 26861 2-269056 bp Feature: gene Location: 270339-270779 bp Feature: domain Description: Integrase_1 Location: 270345-270561 bp Feature: domain Description: Integrase_1 Location: 270345-270561 bp Feature: gene Location: 271040-271705 bp Feature: domain Description: INT_P4_C Location: 271145-271703 bp Feature: domain Description: INT_P4_C Location: 271 1 45-271 703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UKHZ01000010.1 Klebsiella pneumoniae strain EuSCAPE_FR050 genome assembly, contig: 17870_564SCcontig000010, whole genome shotgun sequence (164543 bp)
Overview 1 RT 1: 144765-147949 bp Neighborhood of RT #1 [144765, 147949] PRK10276 RVT-GII Feature: gene Location: 144765-145190 bp Feature: domain Description: PRK10276 Location: 144768-145176 bp Feature: domain Description: PRK102 76 Location: 144768-145176 bp Feature: gene Location: 145308-145541 bp Feature: gene Location: 145592-147103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145997-146711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145997-146711 bp Feature: gene Location: 146989-147567 bp Feature: gene Location: 147626-147949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII