myRT

myRT report for GCA_900512145.1_18174_4_139

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Seq: UKJN01000027.1 Klebsiella pneumoniae strain EuSCAPE_IL001 genome assembly, contig: 18174_4139SCcontig000027, whole genome shotgun sequence (46077 bp)
Overview 1 RT 1: 14198-18046 bp Neighborhood of RT #1 [14198, 18046] HHA RVT-GII INT_Cre_C Feature: gene Location: 14198-14452 bp Feature: domain Description: HHA Location: 14249-14432 bp Feature: domain Description: HHA Location: 1 4249-1 4432 bp Feature: gene Location: 14744-14956 bp Feature: gene Location: 15031-16320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15358-15889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5358-1 5889 bp Feature: gene Location: 16527-17663 bp Feature: domain Description: INT_Cre_C Location: 16950-17604 bp Feature: domain Description: INT_Cre_C Location: 1 6950-1 7604 bp Feature: gene Location: 17729-18046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: UKJN01000006.1 Klebsiella pneumoniae strain EuSCAPE_IL001 genome assembly, contig: 18174_4139SCcontig000006, whole genome shotgun sequence (271771 bp)
Overview 1 RT 1: 233853-241040 bp Neighborhood of RT #1 [233853, 241040] FimC FimD RVT-UG4 EAL Feature: gene Location: 233853-234581 bp Feature: domain Description: FimC Location: 233901-234564 bp Feature: domain Description: FimC Location: 2 33901-2 34564 bp Feature: gene Location: 234613-237222 bp Feature: domain Description: FimD Location: 234670-237211 bp Feature: domain Description: FimD Location: 2 34670-2 372 11 bp Feature: gene Location: 237222-239252 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 237630-238074 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 37630-2 38074 bp Feature: gene Location: 239890-240744 bp Feature: domain Description: EAL Location: 240574-240727 bp Feature: domain Description: EAL Location: 2 40574-2 4072 7 bp Feature: gene Location: 240834-241040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)