myRT

myRT report for GCA_900512255.1_18174_4_16

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Seq: UKJY01000050.1 Klebsiella pneumoniae strain EuSCAPE_DE017 genome assembly, contig: 18174_416SCcontig000050, whole genome shotgun sequence (3109 bp)
Overview 1 RT 1: 2-2629 bp Neighborhood of RT #1 [2, 2874] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 2-304 bp Feature: domain Description: InsE Location: 11-296 bp Feature: domain Description: InsE Location: 1 1 -296 bp Feature: gene Location: 334-759 bp Feature: domain Description: PHA02517 Location: 358-694 bp Feature: domain Description: PHA0251 7 Location: 358-694 bp Feature: gene Location: 1351-2874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1624-2356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 624-2356 bp Feature: domain Description: GIIM Note: maturase Location: 2431-2629 bp Feature: domain Description: GIIM Note: maturase Location: 2431 -2629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: UKJY01000027.1 Klebsiella pneumoniae strain EuSCAPE_DE017 genome assembly, contig: 18174_416SCcontig000027, whole genome shotgun sequence (37406 bp)
Overview 1 RT 1: 21939-26961 bp Neighborhood of RT #1 [21939, 26969] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 21939-22904 bp Feature: domain Description: ArdC Location: 22065-22899 bp Feature: domain Description: ArdC Location: 2 2 065-2 2 899 bp Feature: gene Location: 23036-23305 bp Feature: gene Location: 23374-24861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23779-24469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3779-2 4469 bp Feature: gene Location: 25015-25698 bp Feature: domain Description: PRK10276 Location: 25318-25681 bp Feature: domain Description: PRK102 76 Location: 2 5318-2 5681 bp Feature: gene Location: 25698-26969 bp Feature: domain Description: umuC Location: 25701-26961 bp Feature: domain Description: umuC Location: 2 5701-2 6961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: UKJY01000014.1 Klebsiella pneumoniae strain EuSCAPE_DE017 genome assembly, contig: 18174_416SCcontig000014, whole genome shotgun sequence (195030 bp)
Overview 1 RT 1: 166343-169381 bp Neighborhood of RT #1 [166343, 169381] PRK09678 RVT-UG11 SmpB Feature: gene Location: 166343-166561 bp Feature: domain Description: PRK09678 Location: 166346-166544 bp Feature: domain Description: PRK09678 Location: 1663 46-166544 bp Feature: gene Location: 166808-166996 bp Feature: gene Location: 167439-167738 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167442-167553 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167442-167553 bp Feature: gene Location: 168354-168836 bp Feature: domain Description: SmpB Location: 168384-168828 bp Feature: domain Description: SmpB Location: 1683 84-168828 bp Feature: gene Location: 168968-169381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668)

Seq: UKJY01000016.1 Klebsiella pneumoniae strain EuSCAPE_DE017 genome assembly, contig: 18174_416SCcontig000016, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4 _C Location: 119162-119720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UKJY01000035.1 Klebsiella pneumoniae strain EuSCAPE_DE017 genome assembly, contig: 18174_416SCcontig000035, whole genome shotgun sequence (15635 bp)
Overview 1 RT 1: 7608-10816 bp Neighborhood of RT #1 [7608, 10816] PRK10276 RVT-GII Feature: gene Location: 7608-8033 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: gene Location: 8151-8384 bp Feature: gene Location: 8435-9970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-95 78 bp Feature: gene Location: 10204-10434 bp Feature: gene Location: 10493-10816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII