myRT

myRT report for GCA_900512365.1_18174_4_33

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Seq: UKKO01000018.1 Klebsiella pneumoniae strain EuSCAPE_DE034 genome assembly, contig: 18174_433SCcontig000018, whole genome shotgun sequence (58501 bp)
Overview 1 RT 1: 49016-52286 bp Neighborhood of RT #1 [49016, 52300] RVT-GII PRK10276 Feature: gene Location: 49016-49231 bp Feature: gene Location: 49498-49728 bp Feature: gene Location: 49962-51473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51 081 bp Feature: gene Location: 51524-51757 bp Feature: gene Location: 51875-52300 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Feature: domain Description: PRK1 0276 Location: 51 878-52286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UKKO01000008.1 Klebsiella pneumoniae strain EuSCAPE_DE034 genome assembly, contig: 18174_433SCcontig000008, whole genome shotgun sequence (273859 bp)
Overview 1 RT 1: 221479-228347 bp Neighborhood of RT #1 [221479, 228349] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 221479-222207 bp Feature: domain Description: FimC Location: 221512-222190 bp Feature: domain Description: FimC Location: 2 2 1512 -2 2 2 190 bp Feature: gene Location: 222239-224848 bp Feature: domain Description: FimD Location: 222296-224837 bp Feature: domain Description: FimD Location: 2 2 2 2 96-2 2 4837 bp Feature: gene Location: 224848-226926 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225256-225700 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 2 52 56-2 2 5700 bp Feature: gene Location: 226983-227423 bp Feature: domain Description: Integrase_1 Location: 226989-227205 bp Feature: domain Description: Integrase_1 Location: 2 2 6989-2 2 72 05 bp Feature: gene Location: 227684-228349 bp Feature: domain Description: INT_P4_C Location: 227789-228347 bp Feature: domain Description: INT_P4_C Location: 2 2 7789-2 2 8347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)