myRT

myRT report for GCA_900512445.1_18174_4_37

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Seq: UKKS01000022.1 Klebsiella pneumoniae strain EuSCAPE_DE038 genome assembly, contig: 18174_437SCcontig000022, whole genome shotgun sequence (18499 bp)
Overview 1 RT 1: 3767-8203 bp Neighborhood of RT #1 [3767, 8211] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 3767-4144 bp Ori: SXT41479.1 Feature: domain Description: DDE_Tnp_IS1 Location: 3770-4142 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3770-41 42 bp Feature: gene Location: 4189-4464 bp Ori: SXT41481.1 Feature: domain Description: InsA Location: 4195-4456 bp Feature: domain Description: InsA Location: 41 95-4456 bp Feature: gene Location: 4616-6100 bp Ori: SXT41483.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5018-5708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501 8-5708 bp Feature: gene Location: 6509-6940 bp Ori: SXT41484.1 Gene: umuD_3 Feature: domain Description: PRK10276 Location: 6560-6923 bp Feature: domain Description: PRK1 0276 Location: 6560-6923 bp Feature: gene Location: 6940-8211 bp Ori: SXT41486.1 Gene: umuC_3 Feature: domain Description: umuC Location: 6943-8203 bp Feature: domain Description: umuC Location: 6943-8203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: UKKS01000006.1 Klebsiella pneumoniae strain EuSCAPE_DE038 genome assembly, contig: 18174_437SCcontig000006, whole genome shotgun sequence (295757 bp)
Overview 1 RT 1: 154725-157785 bp Neighborhood of RT #1 [154725, 157785] DinI RVT-Retrons Feature: gene Location: 154725-155165 bp Ori: SXT38105.1 Gene: dinI_3 Feature: domain Description: DinI Location: 154980-155163 bp Feature: domain Description: DinI Location: 154980-155163 bp Feature: gene Location: 155594-155749 bp Feature: gene Location: 156072-157022 bp Ori: SXT38107.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 156252-156795 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1562 52 -156795 bp Feature: gene Location: 157092-157451 bp Feature: gene Location: 157591-157785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons

Seq: UKKS01000003.1 Klebsiella pneumoniae strain EuSCAPE_DE038 genome assembly, contig: 18174_437SCcontig000003, whole genome shotgun sequence (536936 bp)
Overview 1 RT 1: 145810-151114 bp Neighborhood of RT #1 [145810, 151116] PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 145810-146229 bp Ori: SXT36664.1 Gene: umuD_1 Feature: domain Description: PRK10276 Location: 145813-146224 bp Feature: domain Description: PRK10276 Location: 145813 -146224 bp Feature: gene Location: 146231-147496 bp Ori: SXT36666.1 Gene: umuC_1 Feature: domain Description: umuC Location: 146234-147494 bp Feature: domain Description: umuC Location: 14623 4-147494 bp Feature: gene Location: 148169-149077 bp Ori: SXT36669.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 148442-148898 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 148442-148898 bp Feature: gene Location: 149278-149946 bp Ori: SXT36672.1 Gene: yedK_1 Feature: domain Description: PRK09951 Location: 149281-149944 bp Feature: domain Description: PRK09951 Location: 149281-149944 bp Feature: gene Location: 150151-151116 bp Ori: SXT36675.1 Gene: sapB_2 Feature: domain Description: PRK15110 Location: 150154-151114 bp Feature: domain Description: PRK15110 Location: 150154-151114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)