myRT

myRT report for GCA_900512775.1_18174_4_9

Download annotations/find similar RTs

Seq: UKMB01000013.1 Klebsiella pneumoniae strain EuSCAPE_DE010 genome assembly, contig: 18174_49SCcontig000013, whole genome shotgun sequence (158015 bp)
Overview 1 RT 1: 79459-85911 bp Neighborhood of RT #1 [79459, 85911] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 79459-79764 bp Feature: gene Location: 80647-82923 bp Feature: domain Description: AAA_15 Location: 80680-81688 bp Feature: domain Description: AAA_1 5 Location: 80680-81 688 bp Feature: gene Location: 83038-84138 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83218-83752 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8321 8-83752 bp Feature: gene Location: 84794-85630 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 85283-85454 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 85283-85454 bp Feature: gene Location: 85660-85911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: UKMB01000046.1 Klebsiella pneumoniae strain EuSCAPE_DE010 genome assembly, contig: 18174_49SCcontig000046, whole genome shotgun sequence (9686 bp)
Overview 1 RT 1: 5347-9667 bp Neighborhood of RT #1 [5347, 9684] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 5347-5649 bp Feature: domain Description: InsE Location: 5356-5638 bp Feature: domain Description: InsE Location: 5356-5638 bp Feature: gene Location: 5676-6101 bp Feature: domain Description: PHA02517 Location: 5700-6036 bp Feature: domain Description: PHA02 517 Location: 5700-6036 bp Feature: gene Location: 6693-8216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6966-7698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6966-7698 bp Feature: domain Description: GIIM Note: maturase Location: 7773-7971 bp Feature: domain Description: GIIM Note: maturase Location: 7773-7971 bp Feature: gene Location: 8381-8539 bp Feature: domain Description: PHA02517 Location: 8384-8504 bp Feature: domain Description: PHA02 517 Location: 8384-8504 bp Feature: gene Location: 8758-9684 bp Feature: domain Description: COG3547 Location: 8797-9667 bp Feature: domain Description: COG3547 Location: 8797-9667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: UKMB01000001.1 Klebsiella pneumoniae strain EuSCAPE_DE010 genome assembly, contig: 18174_49SCcontig000001, whole genome shotgun sequence (400451 bp)
Overview 1 RT 1: 25609-29865 bp Neighborhood of RT #1 [25609, 29879] PRK10724 SmpB RVT-UG11 D Feature: gene Location: 25609-26046 bp Feature: domain Description: PRK10724 Location: 25612-26041 bp Feature: domain Description: PRK10724 Location: 25612-26041 bp Feature: gene Location: 26196-26678 bp Feature: domain Description: SmpB Location: 26226-26670 bp Feature: domain Description: SmpB Location: 26226-26670 bp Feature: gene Location: 27293-27592 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27296-27407 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27296-27407 bp Feature: gene Location: 28035-28223 bp Feature: gene Location: 28779-29879 bp Feature: domain Description: D Location: 28785-29865 bp Feature: domain Description: D Location: 28785-29865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, D (PHA02561)

Seq: UKMB01000073.1 Klebsiella pneumoniae strain EuSCAPE_DE010 genome assembly, contig: 18174_49SCcontig000073, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 66-1156 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII