myRT

myRT report for GCA_900512905.1_18174_5_106

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Seq: UKMN01000007.1 Klebsiella pneumoniae strain EuSCAPE_IT027 genome assembly, contig: 18174_5106SCcontig000007, whole genome shotgun sequence (274190 bp)
Overview 1 RT 1: 45840-52693 bp Neighborhood of RT #1 [45840, 52710] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 45840-46505 bp Feature: domain Description: INT_P4_C Location: 45945-46503 bp Feature: domain Description: INT_P4_C Location: 45945-46503 bp Feature: gene Location: 46766-47206 bp Feature: domain Description: Integrase_1 Location: 46772-46988 bp Feature: domain Description: Integrase_1 Location: 46772-46988 bp Feature: gene Location: 47263-49341 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47671-48115 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47671 -481 1 5 bp Feature: gene Location: 49341-51950 bp Feature: domain Description: FimD Location: 49398-51939 bp Feature: domain Description: FimD Location: 49398-51 939 bp Feature: gene Location: 51982-52710 bp Feature: domain Description: FimC Location: 52015-52693 bp Feature: domain Description: FimC Location: 5201 5-52693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: UKMN01000018.1 Klebsiella pneumoniae strain EuSCAPE_IT027 genome assembly, contig: 18174_5106SCcontig000018, whole genome shotgun sequence (61691 bp)
Overview 1 RT 1: 49016-52286 bp Neighborhood of RT #1 [49016, 52300] RVT-GII PRK10276 Feature: gene Location: 49016-49231 bp Feature: gene Location: 49498-49728 bp Feature: gene Location: 49962-51473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: gene Location: 51524-51757 bp Feature: gene Location: 51875-52300 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Feature: domain Description: PRK102 76 Location: 51878-52 2 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)