myRT

myRT report for GCA_900513535.1_18174_5_30

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Seq: UKPB01000005.1 Klebsiella pneumoniae strain EuSCAPE_IL054 genome assembly, contig: 18174_530SCcontig000005, whole genome shotgun sequence (295757 bp)
Overview 1 RT 1: 154725-157785 bp Neighborhood of RT #1 [154725, 157785] DinI RVT-Retrons Feature: gene Location: 154725-155165 bp Ori: SXZ42789.1 Gene: dinI_2 Feature: domain Description: DinI Location: 154980-155163 bp Feature: domain Description: DinI Location: 1 54980-1 551 63 bp Feature: gene Location: 155594-155749 bp Feature: gene Location: 156072-157022 bp Ori: SXZ42792.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 156252-156795 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 56252-1 56795 bp Feature: gene Location: 157092-157451 bp Feature: gene Location: 157591-157785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons

Seq: UKPB01000023.1 Klebsiella pneumoniae strain EuSCAPE_IL054 genome assembly, contig: 18174_530SCcontig000023, whole genome shotgun sequence (15435 bp)
Overview 1 RT 1: 7225-11667 bp Neighborhood of RT #1 [7225, 11669] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 7225-8496 bp Ori: SXZ51336.1 Gene: umuC_4 Feature: domain Description: umuC Location: 7228-8488 bp Feature: domain Description: umuC Location: 72 2 8-8488 bp Feature: gene Location: 8496-8927 bp Ori: SXZ51338.1 Gene: umuD_4 Feature: domain Description: PRK10276 Location: 8547-8910 bp Feature: domain Description: PRK102 76 Location: 8547-8910 bp Feature: gene Location: 9333-10820 bp Ori: SXZ51339.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9738-10428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9738-1042 8 bp Feature: gene Location: 10972-11247 bp Ori: SXZ51341.1 Feature: domain Description: InsA Location: 10978-11239 bp Feature: domain Description: InsA Location: 10978-112 39 bp Feature: gene Location: 11292-11669 bp Ori: SXZ51343.1 Feature: domain Description: DDE_Tnp_IS1 Location: 11295-11667 bp Feature: domain Description: DDE_Tnp_IS1 Location: 112 95-11667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: UKPB01000007.1 Klebsiella pneumoniae strain EuSCAPE_IL054 genome assembly, contig: 18174_530SCcontig000007, whole genome shotgun sequence (248747 bp)
Overview 1 RT 1: 219147-224451 bp Neighborhood of RT #1 [219147, 224453] PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 219147-219566 bp Ori: SXZ43832.1 Gene: umuD_2 Feature: domain Description: PRK10276 Location: 219150-219561 bp Feature: domain Description: PRK10276 Location: 219150-219561 bp Feature: gene Location: 219568-220833 bp Ori: SXZ43833.1 Gene: umuC_2 Feature: domain Description: umuC Location: 219571-220831 bp Feature: domain Description: umuC Location: 219571-22083 1 bp Feature: gene Location: 221506-222414 bp Ori: SXZ43834.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 221779-222235 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 221779-22223 5 bp Feature: gene Location: 222615-223283 bp Ori: SXZ43835.1 Gene: yedK_2 Feature: domain Description: PRK09951 Location: 222618-223281 bp Feature: domain Description: PRK09951 Location: 222618-223 281 bp Feature: gene Location: 223488-224453 bp Ori: SXZ43836.1 Gene: sapB_2 Feature: domain Description: PRK15110 Location: 223491-224451 bp Feature: domain Description: PRK15110 Location: 223 491-224451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)