myRT

myRT report for GCA_900513705.1_18174_5_50

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Seq: UKPR01000002.1 Klebsiella pneumoniae strain EuSCAPE_IL075 genome assembly, contig: 18174_550SCcontig000002, whole genome shotgun sequence (318080 bp)
Overview 1 RT 1: 44466-51319 bp Neighborhood of RT #1 [44466, 51336] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 44466-45131 bp Feature: domain Description: INT_P4_C Location: 44571-45129 bp Feature: domain Description: INT_P4_C Location: 44571 -451 29 bp Feature: gene Location: 45392-45832 bp Feature: domain Description: Integrase_1 Location: 45398-45614 bp Feature: domain Description: Integrase_1 Location: 45398-4561 4 bp Feature: gene Location: 45889-47967 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 46297-46741 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 46297-46741 bp Feature: gene Location: 47967-50576 bp Feature: domain Description: FimD Location: 48024-50565 bp Feature: domain Description: FimD Location: 48024-50565 bp Feature: gene Location: 50608-51336 bp Feature: domain Description: FimC Location: 50641-51319 bp Feature: domain Description: FimC Location: 50641 -51 31 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: UKPR01000036.1 Klebsiella pneumoniae strain EuSCAPE_IL075 genome assembly, contig: 18174_550SCcontig000036, whole genome shotgun sequence (22460 bp)
Overview 1 RT 1: 18051-21167 bp Neighborhood of RT #1 [18051, 21167] PRK10276 RVT-GII Feature: gene Location: 18051-18476 bp Feature: domain Description: PRK10276 Location: 18054-18462 bp Feature: domain Description: PRK102 76 Location: 18054-18462 bp Feature: gene Location: 18670-18882 bp Feature: gene Location: 18957-20366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19284-19974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192 84-19974 bp Feature: gene Location: 20600-20830 bp Feature: gene Location: 20889-21167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII