myRT

myRT report for GCA_900513805.1_18174_5_59

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Seq: UKQA01000045.1 Klebsiella pneumoniae strain EuSCAPE_IL084 genome assembly, contig: 18174_559SCcontig000045, whole genome shotgun sequence (20803 bp)
Overview 1 RT 1: 5453-8701 bp Neighborhood of RT #1 [5453, 8715] RVT-GII PRK10276 Feature: gene Location: 5453-5674 bp Feature: gene Location: 5936-6166 bp Feature: gene Location: 6400-7887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6805-7495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6805-7495 bp Feature: gene Location: 7893-8060 bp Feature: gene Location: 8290-8715 bp Feature: domain Description: PRK10276 Location: 8293-8701 bp Feature: domain Description: PRK1 0276 Location: 8293-8701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UKQA01000025.1 Klebsiella pneumoniae strain EuSCAPE_IL084 genome assembly, contig: 18174_559SCcontig000025, whole genome shotgun sequence (69884 bp)
Overview 1 RT 1: 25732-29865 bp Neighborhood of RT #1 [25732, 29879] SmpB RVT-UG11 PRK09678 D Feature: gene Location: 25732-26064 bp Feature: gene Location: 26196-26678 bp Feature: domain Description: SmpB Location: 26226-26670 bp Feature: domain Description: SmpB Location: 2 62 2 6-2 6670 bp Feature: gene Location: 27293-28066 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27428-27881 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 742 8-2 7881 bp Feature: gene Location: 28470-28688 bp Feature: domain Description: PRK09678 Location: 28473-28671 bp Feature: domain Description: PRK09678 Location: 2 8473-2 8671 bp Feature: gene Location: 28779-29879 bp Feature: domain Description: D Location: 28785-29865 bp Feature: domain Description: D Location: 2 8785-2 9865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional), D (PHA02561)

Seq: UKQA01000036.1 Klebsiella pneumoniae strain EuSCAPE_IL084 genome assembly, contig: 18174_559SCcontig000036, whole genome shotgun sequence (34778 bp)
Overview 1 RT 1: 25621-29046 bp Neighborhood of RT #1 [25621, 29111] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 25621-25827 bp Feature: gene Location: 26002-26406 bp Feature: domain Description: PHA02517 Location: 26005-26395 bp Feature: domain Description: PHA02517 Location: 26005-263 95 bp Feature: gene Location: 26571-28094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26844-27576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26844-27576 bp Feature: domain Description: GIIM Note: maturase Location: 27651-27849 bp Feature: domain Description: GIIM Note: maturase Location: 27651-27849 bp Feature: gene Location: 28048-28473 bp Feature: gene Location: 28686-29111 bp Feature: domain Description: PHA02517 Location: 28710-29046 bp Feature: domain Description: PHA02517 Location: 28710-29046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: UKQA01000016.1 Klebsiella pneumoniae strain EuSCAPE_IL084 genome assembly, contig: 18174_559SCcontig000016, whole genome shotgun sequence (130695 bp)
Overview 1 RT 1: 99758-106210 bp Neighborhood of RT #1 [99758, 106210] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 99758-100063 bp Feature: gene Location: 100946-103222 bp Feature: domain Description: AAA_15 Location: 100979-101987 bp Feature: domain Description: AAA_15 Location: 100979-101987 bp Feature: gene Location: 103337-104437 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103517-104051 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103517-104 051 bp Feature: gene Location: 105093-105929 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 105582-105753 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 105582-105753 bp Feature: gene Location: 105959-106210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)