myRT

myRT report for GCA_900514105.1_18174_5_89

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Seq: UKQZ01000006.1 Klebsiella pneumoniae strain EuSCAPE_IT010 genome assembly, contig: 18174_589SCcontig000006, whole genome shotgun sequence (268689 bp)
Overview 1 RT 1: 28648-35501 bp Neighborhood of RT #1 [28648, 35518] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 28648-29313 bp Feature: domain Description: INT_P4_C Location: 28753-29311 bp Feature: domain Description: INT_P4_C Location: 28753-2931 1 bp Feature: gene Location: 29574-30014 bp Feature: domain Description: Integrase_1 Location: 29580-29796 bp Feature: domain Description: Integrase_1 Location: 29580-29796 bp Feature: gene Location: 30071-32149 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30479-30923 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30479-30923 bp Feature: gene Location: 32149-34758 bp Feature: domain Description: FimD Location: 32206-34747 bp Feature: domain Description: FimD Location: 32206-34747 bp Feature: gene Location: 34790-35518 bp Feature: domain Description: FimC Location: 34823-35501 bp Feature: domain Description: FimC Location: 34823-35501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: UKQZ01000035.1 Klebsiella pneumoniae strain EuSCAPE_IT010 genome assembly, contig: 18174_589SCcontig000035, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 85-1464 bp Neighborhood of RT #1 [85, 1856] RVT-GII Feature: gene Location: 85-318 bp Feature: gene Location: 372-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII