myRT

myRT report for GCA_900514205.1_18174_6_1

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Seq: UKRL01000003.1 Klebsiella pneumoniae strain EuSCAPE_IT089 genome assembly, contig: 18174_61SCcontig000003, whole genome shotgun sequence (384802 bp)
Overview 1 RT 1: 345943-352811 bp Neighborhood of RT #1 [345943, 352813] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 345943-346671 bp Feature: domain Description: FimC Location: 345991-346654 bp Feature: domain Description: FimC Location: 345991 -346654 bp Feature: gene Location: 346703-349312 bp Feature: domain Description: FimD Location: 346760-349301 bp Feature: domain Description: FimD Location: 346760-349301 bp Feature: gene Location: 349312-351390 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 349720-350164 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 349720-3501 64 bp Feature: gene Location: 351447-351887 bp Feature: domain Description: Integrase_1 Location: 351453-351669 bp Feature: domain Description: Integrase_1 Location: 351 453-351 669 bp Feature: gene Location: 352148-352813 bp Feature: domain Description: INT_P4_C Location: 352253-352811 bp Feature: domain Description: INT_P4_C Location: 352253-35281 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UKRL01000030.1 Klebsiella pneumoniae strain EuSCAPE_IT089 genome assembly, contig: 18174_61SCcontig000030, whole genome shotgun sequence (14085 bp)
Overview 1 RT 1: 4720-7990 bp Neighborhood of RT #1 [4720, 8004] RVT-GII PRK10276 Feature: gene Location: 4720-4935 bp Feature: gene Location: 5202-5432 bp Feature: gene Location: 5666-7177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6785 bp Feature: gene Location: 7228-7461 bp Feature: gene Location: 7579-8004 bp Feature: domain Description: PRK10276 Location: 7582-7990 bp Feature: domain Description: PRK102 76 Location: 7582 -7990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)