myRT

myRT report for GCA_900514245.1_18174_6_102

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Seq: UKRW01000016.1 Klebsiella pneumoniae strain EuSCAPE_IT198 genome assembly, contig: 18174_6102SCcontig000016, whole genome shotgun sequence (146378 bp)
Overview 1 RT 1: 107519-114387 bp Neighborhood of RT #1 [107519, 114389] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 107519-108247 bp Feature: domain Description: FimC Location: 107567-108230 bp Feature: domain Description: FimC Location: 1 07567-1 08230 bp Feature: gene Location: 108279-110888 bp Feature: domain Description: FimD Location: 108336-110877 bp Feature: domain Description: FimD Location: 1 08336-1 1 0877 bp Feature: gene Location: 110888-112966 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 111296-111740 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 1 296-1 1 1 740 bp Feature: gene Location: 113023-113463 bp Feature: domain Description: Integrase_1 Location: 113029-113245 bp Feature: domain Description: Integrase_1 Location: 1 1 3029-1 1 3245 bp Feature: gene Location: 113724-114389 bp Feature: domain Description: INT_P4_C Location: 113829-114387 bp Feature: domain Description: INT_P4_C Location: 1 1 3829-1 1 4387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UKRW01000063.1 Klebsiella pneumoniae strain EuSCAPE_IT198 genome assembly, contig: 18174_6102SCcontig000063, whole genome shotgun sequence (1917 bp)
Overview 1 RT 1: 62-1915 bp Neighborhood of RT #1 [62, 1915] RVT-GII Feature: gene Location: 62-1549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1157 bp Feature: gene Location: 1703-1915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII