myRT

myRT report for GCA_900514315.1_18174_6_111

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Seq: UKRY01000171.1 Klebsiella pneumoniae strain EuSCAPE_IT207 genome assembly, contig: 18174_6111SCcontig000171, whole genome shotgun sequence (250 bp)
Overview 1 RT 1: 1-184 bp Neighborhood of RT #1 [1, 249] RVT-GII Feature: gene Location: 1-249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-1 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: UKRY01000133.1 Klebsiella pneumoniae strain EuSCAPE_IT207 genome assembly, contig: 18174_6111SCcontig000133, whole genome shotgun sequence (296 bp)
Overview 1 RT 1: 1-289 bp Neighborhood of RT #1 [1, 294] RVT-GII Feature: gene Location: 1-294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-2 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: UKRY01000028.1 Klebsiella pneumoniae strain EuSCAPE_IT207 genome assembly, contig: 18174_6111SCcontig000028, whole genome shotgun sequence (28387 bp)
Overview 1 RT 1: 8760-13785 bp Neighborhood of RT #1 [8760, 13790] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 8760-10031 bp Feature: domain Description: umuC Location: 8763-10023 bp Feature: domain Description: umuC Location: 8763 -10023 bp Feature: gene Location: 10031-10714 bp Feature: domain Description: PRK10276 Location: 10334-10697 bp Feature: domain Description: PRK10276 Location: 103 3 4-10697 bp Feature: gene Location: 10868-12355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11273-11963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11273 -11963 bp Feature: gene Location: 12424-12693 bp Feature: gene Location: 12825-13790 bp Feature: domain Description: ArdC Location: 12951-13785 bp Feature: domain Description: ArdC Location: 12951-13 785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: UKRY01000026.1 Klebsiella pneumoniae strain EuSCAPE_IT207 genome assembly, contig: 18174_6111SCcontig000026, whole genome shotgun sequence (34868 bp)
Overview 1 RT 1: 26865-30049 bp Neighborhood of RT #1 [26865, 30049] PRK10276 RVT-GII Feature: gene Location: 26865-27290 bp Feature: domain Description: PRK10276 Location: 26868-27276 bp Feature: domain Description: PRK10276 Location: 26868-27276 bp Feature: gene Location: 27408-27641 bp Feature: gene Location: 27692-29203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28097-28811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28097-28811 bp Feature: gene Location: 29437-29667 bp Feature: gene Location: 29726-30049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: UKRY01000015.1 Klebsiella pneumoniae strain EuSCAPE_IT207 genome assembly, contig: 18174_6111SCcontig000015, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 112900-1135 63 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 118362-1185 78 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UKRY01000018.1 Klebsiella pneumoniae strain EuSCAPE_IT207 genome assembly, contig: 18174_6111SCcontig000018, whole genome shotgun sequence (114847 bp)
Overview 1 RT 1: 105837-110385 bp Neighborhood of RT #1 [105837, 110396] PHA02517 RVT-GII GIIM PHA02517 HTH_38 Tra8 Feature: gene Location: 105837-106007 bp Feature: gene Location: 106035-106451 bp Feature: domain Description: PHA02517 Location: 106038-106443 bp Feature: domain Description: PHA02517 Location: 106 038-106 443 bp Feature: gene Location: 106574-108097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106847-107579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106 847-107579 bp Feature: domain Description: GIIM Note: maturase Location: 107654-107852 bp Feature: domain Description: GIIM Note: maturase Location: 1076 54-107852 bp Feature: gene Location: 108689-109114 bp Feature: domain Description: PHA02517 Location: 108713-109049 bp Feature: domain Description: PHA02517 Location: 108713-109049 bp Feature: gene Location: 109245-110396 bp Feature: domain Description: HTH_38 Location: 109254-109368 bp Feature: domain Description: HTH_38 Location: 109254-10936 8 bp Feature: domain Description: Tra8 Location: 109404-110385 bp Feature: domain Description: Tra8 Location: 109404-110385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_38 (pfam13936), Tra8 (COG2826)