myRT

myRT report for GCA_900514345.1_18174_6_112

Download annotations/find similar RTs

Seq: UKSB01000001.1 Klebsiella pneumoniae strain EuSCAPE_IT208 genome assembly, contig: 18174_6112SCcontig000001, whole genome shotgun sequence (771297 bp)
Overview 1 RT 1: 742622-745696 bp Neighborhood of RT #1 [742622, 745701] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 742622-742840 bp Feature: domain Description: PRK09678 Location: 742625-742823 bp Feature: domain Description: PRK09678 Location: 742625-742823 bp Feature: gene Location: 743087-743275 bp Feature: gene Location: 743718-744017 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 743721-743832 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 743721 -743832 bp Feature: gene Location: 744632-745114 bp Feature: domain Description: SmpB Location: 744662-745106 bp Feature: domain Description: SmpB Location: 744662-7451 06 bp Feature: gene Location: 745264-745701 bp Feature: domain Description: PRK10724 Location: 745267-745696 bp Feature: domain Description: PRK1 0724 Location: 745267-745696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: UKSB01000012.1 Klebsiella pneumoniae strain EuSCAPE_IT208 genome assembly, contig: 18174_6112SCcontig000012, whole genome shotgun sequence (145763 bp)
Overview 1 RT 1: 127678-134130 bp Neighborhood of RT #1 [127678, 134130] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 127678-127983 bp Feature: gene Location: 128866-131142 bp Feature: domain Description: AAA_15 Location: 128899-129907 bp Feature: domain Description: AAA_15 Location: 12 8899-12 9907 bp Feature: gene Location: 131257-132357 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 131437-131971 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 131437-131971 bp Feature: gene Location: 133013-133849 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 133502-133673 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 133502 -133673 bp Feature: gene Location: 133879-134130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: UKSB01000031.1 Klebsiella pneumoniae strain EuSCAPE_IT208 genome assembly, contig: 18174_6112SCcontig000031, whole genome shotgun sequence (8887 bp)
Overview 1 RT 1: 347-3264 bp Neighborhood of RT #1 [347, 3269] RVT-GII ArdC Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: gene Location: 1903-2172 bp Feature: gene Location: 2304-3269 bp Feature: domain Description: ArdC Location: 2430-3264 bp Feature: domain Description: ArdC Location: 243 0-3 264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, ArdC (COG4227)