myRT

myRT report for GCA_900514375.1_18174_6_117

Download annotations/find similar RTs

Seq: UKSH01000005.1 Klebsiella pneumoniae strain EuSCAPE_IT213 genome assembly, contig: 18174_6117SCcontig000005, whole genome shotgun sequence (277108 bp)
Overview 1 RT 1: 221990-228424 bp Neighborhood of RT #1 [221990, 228424] FimD RVT-UG4 EAL Feature: gene Location: 221990-224599 bp Feature: domain Description: FimD Location: 222047-224588 bp Feature: domain Description: FimD Location: 222047-224588 bp Feature: gene Location: 224692-224964 bp Feature: gene Location: 224596-226629 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225007-225451 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225007-225451 bp Feature: gene Location: 227274-228128 bp Feature: domain Description: EAL Location: 227958-228111 bp Feature: domain Description: EAL Location: 227958-2281 1 1 bp Feature: gene Location: 228218-228424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimD (COG3188), RVT-UG4, EAL (smart00052)

Seq: UKSH01000032.1 Klebsiella pneumoniae strain EuSCAPE_IT213 genome assembly, contig: 18174_6117SCcontig000032, whole genome shotgun sequence (17725 bp)
Overview 1 RT 1: 1429-5550 bp Neighborhood of RT #1 [1429, 5550] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 1429-2079 bp Feature: domain Description: TIGR02646 Location: 1495-1894 bp Feature: domain Description: TIGR02 646 Location: 1495-1894 bp Feature: gene Location: 2082-3734 bp Feature: domain Description: COG3950 Location: 2280-3696 bp Feature: domain Description: COG3950 Location: 2 2 80-3696 bp Feature: gene Location: 3731-4666 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3833-4433 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3833-4433 bp Feature: gene Location: 4681-4815 bp Feature: gene Location: 5089-5550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons