myRT

myRT report for GCA_900514385.1_18174_6_119

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Seq: UKSF01000364.1 Klebsiella pneumoniae strain EuSCAPE_IT215 genome assembly, contig: 18174_6119SCcontig000364, whole genome shotgun sequence (256 bp)
Overview 1 RT 1: 3-252 bp Neighborhood of RT #1 [3, 254] RVT-GII Feature: gene Location: 3-254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: UKSF01000026.1 Klebsiella pneumoniae strain EuSCAPE_IT215 genome assembly, contig: 18174_6119SCcontig000026, whole genome shotgun sequence (14085 bp)
Overview 1 RT 1: 4720-7990 bp Neighborhood of RT #1 [4720, 8004] RVT-GII PRK10276 Feature: gene Location: 4720-4935 bp Feature: gene Location: 5202-5432 bp Feature: gene Location: 5666-7177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6785 bp Feature: gene Location: 7228-7461 bp Feature: gene Location: 7579-8004 bp Feature: domain Description: PRK10276 Location: 7582-7990 bp Feature: domain Description: PRK102 76 Location: 7582 -7990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UKSF01000007.1 Klebsiella pneumoniae strain EuSCAPE_IT215 genome assembly, contig: 18174_6119SCcontig000007, whole genome shotgun sequence (303661 bp)
Overview 1 RT 1: 264835-271703 bp Neighborhood of RT #1 [264835, 271705] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 264835-265563 bp Feature: domain Description: FimC Location: 264883-265546 bp Feature: domain Description: FimC Location: 264883 -265546 bp Feature: gene Location: 265595-268204 bp Feature: domain Description: FimD Location: 265652-268193 bp Feature: domain Description: FimD Location: 265652-268193 bp Feature: gene Location: 268204-270282 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268612-269056 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268612-269056 bp Feature: gene Location: 270339-270779 bp Feature: domain Description: Integrase_1 Location: 270345-270561 bp Feature: domain Description: Integrase_1 Location: 2703 45-270561 bp Feature: gene Location: 271040-271705 bp Feature: domain Description: INT_P4_C Location: 271145-271703 bp Feature: domain Description: INT_P4_C Location: 271145-271703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)