myRT

myRT report for GCA_900514455.1_18174_6_129

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Seq: UKSP01000096.1 Klebsiella pneumoniae strain EuSCAPE_IT225 genome assembly, contig: 18174_6129SCcontig000096, whole genome shotgun sequence (1888 bp)
Overview 1 RT 1: 33-1886 bp Neighborhood of RT #1 [33, 1886] RVT-GII Feature: gene Location: 33-1520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438-1128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438-1 1 28 bp Feature: gene Location: 1674-1886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: UKSP01000028.1 Klebsiella pneumoniae strain EuSCAPE_IT225 genome assembly, contig: 18174_6129SCcontig000028, whole genome shotgun sequence (55914 bp)
Overview 1 RT 1: 3467-10658 bp Neighborhood of RT #1 [3467, 10658] FimC FimD RVT-UG4 EAL Feature: gene Location: 3467-4195 bp Feature: domain Description: FimC Location: 3515-4178 bp Feature: domain Description: FimC Location: 3515-4178 bp Feature: gene Location: 4227-6836 bp Feature: domain Description: FimD Location: 4284-6825 bp Feature: domain Description: FimD Location: 42 84-682 5 bp Feature: gene Location: 6836-8866 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7244-7688 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 72 44-7688 bp Feature: gene Location: 9508-10362 bp Feature: domain Description: EAL Location: 10192-10345 bp Feature: domain Description: EAL Location: 10192 -10345 bp Feature: gene Location: 10452-10658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)

Seq: UKSP01000056.1 Klebsiella pneumoniae strain EuSCAPE_IT225 genome assembly, contig: 18174_6129SCcontig000056, whole genome shotgun sequence (9216 bp)
Overview 1 RT 1: 4353-9145 bp Neighborhood of RT #1 [4353, 9168] umuC PRK10276 RVT-GII StbA Feature: gene Location: 4353-5624 bp Feature: domain Description: umuC Location: 4356-5616 bp Feature: domain Description: umuC Location: 43 56-5616 bp Feature: gene Location: 5624-6331 bp Feature: domain Description: PRK10276 Location: 5948-6314 bp Feature: domain Description: PRK10276 Location: 5948-63 14 bp Feature: gene Location: 6461-7948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6866-7556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6866-7556 bp Feature: gene Location: 8197-9168 bp Feature: domain Description: StbA Location: 8200-9145 bp Feature: domain Description: StbA Location: 8200-9145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406)