myRT

myRT report for GCA_900514595.1_18174_6_148

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Seq: UKSY01000007.1 Klebsiella pneumoniae strain EuSCAPE_IT245 genome assembly, contig: 18174_6148SCcontig000007, whole genome shotgun sequence (283688 bp)
Overview 1 RT 1: 45258-52432 bp Neighborhood of RT #1 [45258, 52449] EAL RVT-UG4 FimD FimC Feature: gene Location: 45258-45464 bp Feature: gene Location: 45554-46408 bp Feature: domain Description: EAL Location: 46238-46391 bp Feature: domain Description: EAL Location: 46238-46391 bp Feature: gene Location: 47050-49080 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47458-47902 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47458-47902 bp Feature: gene Location: 49080-51689 bp Feature: domain Description: FimD Location: 49137-51678 bp Feature: domain Description: FimD Location: 491 37-51 678 bp Feature: gene Location: 51721-52449 bp Feature: domain Description: FimC Location: 51769-52432 bp Feature: domain Description: FimC Location: 51 769-52432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: UKSY01000035.1 Klebsiella pneumoniae strain EuSCAPE_IT245 genome assembly, contig: 18174_6148SCcontig000035, whole genome shotgun sequence (22653 bp)
Overview 1 RT 1: 8194-13537 bp Neighborhood of RT #1 [8194, 13674] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 8194-9465 bp Feature: domain Description: umuC Location: 8197-9460 bp Feature: domain Description: umuC Location: 8197-9460 bp Feature: gene Location: 9465-10139 bp Feature: domain Description: PRK10276 Location: 9717-10125 bp Feature: domain Description: PRK102 76 Location: 9717-1012 5 bp Feature: gene Location: 10293-11780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10698-11388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10698-11388 bp Feature: gene Location: 12029-13000 bp Feature: domain Description: StbA Location: 12032-12977 bp Feature: domain Description: StbA Location: 12 032 -12 977 bp Feature: gene Location: 13003-13674 bp Feature: domain Description: Plasmid_stab_B Location: 13018-13225 bp Feature: domain Description: Plasmid_stab_B Location: 13018-132 2 5 bp Feature: domain Description: Plasmid_stab_B Location: 13330-13537 bp Feature: domain Description: Plasmid_stab_B Location: 13330-13537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)