myRT

myRT report for GCA_900514725.1_18174_6_16

Download annotations/find similar RTs

Seq: UKTN01000069.1 Klebsiella pneumoniae strain EuSCAPE_IT107 genome assembly, contig: 18174_616SCcontig000069, whole genome shotgun sequence (2128 bp)
Overview 1 RT 1: 466-1561 bp Neighborhood of RT #1 [466, 1953] RVT-GII Feature: gene Location: 466-1953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871-1561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871 -1 561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: UKTN01000017.1 Klebsiella pneumoniae strain EuSCAPE_IT107 genome assembly, contig: 18174_616SCcontig000017, whole genome shotgun sequence (142799 bp)
Overview 1 RT 1: 103940-110808 bp Neighborhood of RT #1 [103940, 110810] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 103940-104668 bp Feature: domain Description: FimC Location: 103988-104651 bp Feature: domain Description: FimC Location: 103988-104651 bp Feature: gene Location: 104700-107309 bp Feature: domain Description: FimD Location: 104757-107298 bp Feature: domain Description: FimD Location: 104757-1072 98 bp Feature: gene Location: 107309-109387 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 107717-108161 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 107717-108161 bp Feature: gene Location: 109444-109884 bp Feature: domain Description: Integrase_1 Location: 109450-109666 bp Feature: domain Description: Integrase_1 Location: 109450-109666 bp Feature: gene Location: 110145-110810 bp Feature: domain Description: INT_P4_C Location: 110250-110808 bp Feature: domain Description: INT_P4_C Location: 1102 50-110808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)