myRT

myRT report for GCA_900515055.1_18174_6_5

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Seq: UKUT01000007.1 Klebsiella pneumoniae strain EuSCAPE_IT093 genome assembly, contig: 18174_65SCcontig000007, whole genome shotgun sequence (303661 bp)
Overview 1 RT 1: 264835-271703 bp Neighborhood of RT #1 [264835, 271705] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 264835-265563 bp Feature: domain Description: FimC Location: 264883-265546 bp Feature: domain Description: FimC Location: 264883-265546 bp Feature: gene Location: 265595-268204 bp Feature: domain Description: FimD Location: 265652-268193 bp Feature: domain Description: FimD Location: 265652-2681 93 bp Feature: gene Location: 268204-270282 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268612-269056 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 26861 2-269056 bp Feature: gene Location: 270339-270779 bp Feature: domain Description: Integrase_1 Location: 270345-270561 bp Feature: domain Description: Integrase_1 Location: 270345-270561 bp Feature: gene Location: 271040-271705 bp Feature: domain Description: INT_P4_C Location: 271145-271703 bp Feature: domain Description: INT_P4_C Location: 271 1 45-271 703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UKUT01000049.1 Klebsiella pneumoniae strain EuSCAPE_IT093 genome assembly, contig: 18174_65SCcontig000049, whole genome shotgun sequence (906 bp)
Overview 1 RT 1: 3-897 bp Neighborhood of RT #1 [3, 905] RVT-GII Feature: gene Location: 3-905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 88-897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: UKUT01000023.1 Klebsiella pneumoniae strain EuSCAPE_IT093 genome assembly, contig: 18174_65SCcontig000023, whole genome shotgun sequence (14085 bp)
Overview 1 RT 1: 6082-9266 bp Neighborhood of RT #1 [6082, 9266] PRK10276 RVT-GII Feature: gene Location: 6082-6507 bp Feature: domain Description: PRK10276 Location: 6085-6493 bp Feature: domain Description: PRK10276 Location: 6085-6493 bp Feature: gene Location: 6625-6858 bp Feature: gene Location: 6909-8420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7314-8028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 14-8028 bp Feature: gene Location: 8654-8884 bp Feature: gene Location: 8943-9266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII