myRT

myRT report for GCA_900515165.1_18174_6_59

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Seq: UKVF01000009.1 Klebsiella pneumoniae strain EuSCAPE_IT153 genome assembly, contig: 18174_659SCcontig000009, whole genome shotgun sequence (296479 bp)
Overview 1 RT 1: 256415-263608 bp Neighborhood of RT #1 [256415, 263608] FimC FimD RVT-UG4 EAL Feature: gene Location: 256415-257143 bp Feature: domain Description: FimC Location: 256463-257126 bp Feature: domain Description: FimC Location: 256463-2571 26 bp Feature: gene Location: 257175-259784 bp Feature: domain Description: FimD Location: 257232-259773 bp Feature: domain Description: FimD Location: 257232-259773 bp Feature: gene Location: 259784-261814 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 260192-260636 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2601 92-260636 bp Feature: gene Location: 262458-263312 bp Feature: domain Description: EAL Location: 263142-263295 bp Feature: domain Description: EAL Location: 2631 42-263295 bp Feature: gene Location: 263402-263608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)

Seq: UKVF01000023.1 Klebsiella pneumoniae strain EuSCAPE_IT153 genome assembly, contig: 18174_659SCcontig000023, whole genome shotgun sequence (14085 bp)
Overview 1 RT 1: 4720-7990 bp Neighborhood of RT #1 [4720, 8004] RVT-GII PRK10276 Feature: gene Location: 4720-4935 bp Feature: gene Location: 5202-5432 bp Feature: gene Location: 5666-7177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6785 bp Feature: gene Location: 7228-7461 bp Feature: gene Location: 7579-8004 bp Feature: domain Description: PRK10276 Location: 7582-7990 bp Feature: domain Description: PRK102 76 Location: 7582 -7990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)