myRT

myRT report for GCA_900515235.1_18174_6_74

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Seq: UKVK01000004.1 Klebsiella pneumoniae strain EuSCAPE_IT169 genome assembly, contig: 18174_674SCcontig000004, whole genome shotgun sequence (777115 bp)
Overview 1 RT 1: 267490-274676 bp 2 RT 2: 727254-733982 bp Neighborhood of RT #1 [267490, 274676] FimC FimD RVT-UG4 EAL Neighborhood of RT #2 [727254, 734023] HTH_XRE RVT-Retrons COG3440 Feature: gene Location: 267490-268218 bp Feature: domain Description: FimC Location: 267538-268201 bp Feature: domain Description: FimC Location: 267538-268201 bp Feature: gene Location: 268250-270859 bp Feature: domain Description: FimD Location: 268307-270848 bp Feature: domain Description: FimD Location: 268307-270848 bp Feature: gene Location: 270859-272889 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 271267-271711 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 271 267-271 71 1 bp Feature: gene Location: 273526-274380 bp Feature: domain Description: EAL Location: 274210-274363 bp Feature: domain Description: EAL Location: 27421 0-274363 bp Feature: gene Location: 274470-274676 bp Feature: gene Location: 727254-727580 bp Feature: gene Location: 727632-727922 bp Feature: domain Description: HTH_XRE Location: 727644-727809 bp Feature: domain Description: HTH_XRE Location: 727644-727809 bp Feature: gene Location: 727957-728874 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 728053-728620 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 728053-728620 bp Feature: gene Location: 728915-732766 bp Feature: gene Location: 732965-734023 bp Feature: domain Description: COG3440 Location: 733595-733982 bp Feature: domain Description: COG3440 Location: 733595-733982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052), HTH_XRE (smart00530), RVT-Retrons, COG3440 (Predicted restriction endonuclease )

Seq: UKVK01000015.1 Klebsiella pneumoniae strain EuSCAPE_IT169 genome assembly, contig: 18174_674SCcontig000015, whole genome shotgun sequence (61656 bp)
Overview 1 RT 1: 9357-12541 bp Neighborhood of RT #1 [9357, 12541] PRK10276 RVT-GII Feature: gene Location: 9357-9782 bp Feature: domain Description: PRK10276 Location: 9360-9768 bp Feature: domain Description: PRK102 76 Location: 9360-9768 bp Feature: gene Location: 9900-10133 bp Feature: gene Location: 10184-11695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10589-11303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10589-11303 bp Feature: gene Location: 11929-12159 bp Feature: gene Location: 12218-12541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII