myRT

myRT report for GCA_900515335.1_18174_6_90

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Seq: UKVX01000022.1 Klebsiella pneumoniae strain EuSCAPE_IT185 genome assembly, contig: 18174_690SCcontig000022, whole genome shotgun sequence (43093 bp)
Overview 1 RT 1: 11000-14653 bp Neighborhood of RT #1 [11000, 14664] PRK09951 RVT_N RVT-GII GIIM PRK09951 Feature: gene Location: 11000-11812 bp Feature: gene Location: 11824-12255 bp Feature: domain Description: PRK09951 Location: 11905-12247 bp Feature: domain Description: PRK09951 Location: 1 1 905-1 2247 bp Feature: gene Location: 12262-13755 bp Feature: domain Description: RVT_N Location: 12307-12550 bp Feature: domain Description: RVT_N Location: 1 2307-1 2550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12595-13243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2595-1 3243 bp Feature: domain Description: GIIM Note: maturase Location: 13303-13531 bp Feature: domain Description: GIIM Note: maturase Location: 1 3303-1 3531 bp Feature: gene Location: 14038-14271 bp Feature: gene Location: 14326-14664 bp Feature: domain Description: PRK09951 Location: 14329-14653 bp Feature: domain Description: PRK09951 Location: 1 4329-1 4653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09951 (hypothetical protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: UKVX01000009.1 Klebsiella pneumoniae strain EuSCAPE_IT185 genome assembly, contig: 18174_690SCcontig000009, whole genome shotgun sequence (274220 bp)
Overview 1 RT 1: 45837-52690 bp Neighborhood of RT #1 [45837, 52707] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 45837-46502 bp Feature: domain Description: INT_P4_C Location: 45942-46500 bp Feature: domain Description: INT_P4_C Location: 45942 -46500 bp Feature: gene Location: 46763-47203 bp Feature: domain Description: Integrase_1 Location: 46769-46985 bp Feature: domain Description: Integrase_1 Location: 46769-46985 bp Feature: gene Location: 47260-49338 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47668-48112 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47668-48112 bp Feature: gene Location: 49338-51947 bp Feature: domain Description: FimD Location: 49395-51936 bp Feature: domain Description: FimD Location: 49395-51936 bp Feature: gene Location: 51979-52707 bp Feature: domain Description: FimC Location: 52012-52690 bp Feature: domain Description: FimC Location: 52 012 -52 690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: UKVX01000032.1 Klebsiella pneumoniae strain EuSCAPE_IT185 genome assembly, contig: 18174_690SCcontig000032, whole genome shotgun sequence (14085 bp)
Overview 1 RT 1: 4720-7990 bp Neighborhood of RT #1 [4720, 8004] RVT-GII PRK10276 Feature: gene Location: 4720-4935 bp Feature: gene Location: 5202-5432 bp Feature: gene Location: 5666-7177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6785 bp Feature: gene Location: 7228-7461 bp Feature: gene Location: 7579-8004 bp Feature: domain Description: PRK10276 Location: 7582-7990 bp Feature: domain Description: PRK10276 Location: 7582-7990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)