myRT

myRT report for GCA_900515455.1_18174_7_106

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Seq: UKWJ01000031.1 Klebsiella pneumoniae strain EuSCAPE_IT375 genome assembly, contig: 18174_7106SCcontig000031, whole genome shotgun sequence (33728 bp)
Overview 1 RT 1: 23553-29034 bp Neighborhood of RT #1 [23553, 29042] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 23553-24224 bp Feature: domain Description: Plasmid_stab_B Location: 23568-23775 bp Feature: domain Description: Plasmid_stab_B Location: 23568-23775 bp Feature: domain Description: Plasmid_stab_B Location: 23880-24087 bp Feature: domain Description: Plasmid_stab_B Location: 23880-24087 bp Feature: gene Location: 24227-25198 bp Feature: domain Description: StbA Location: 24230-25175 bp Feature: domain Description: StbA Location: 24230-251 75 bp Feature: gene Location: 25447-26934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25852-26542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25852-26542 bp Feature: gene Location: 26959-27771 bp Feature: domain Description: PRK10276 Location: 27391-27754 bp Feature: domain Description: PRK1 0276 Location: 27391 -27754 bp Feature: gene Location: 27771-29042 bp Feature: domain Description: umuC Location: 27774-29034 bp Feature: domain Description: umuC Location: 27774-29034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: UKWJ01000023.1 Klebsiella pneumoniae strain EuSCAPE_IT375 genome assembly, contig: 18174_7106SCcontig000023, whole genome shotgun sequence (68450 bp)
Overview 1 RT 1: 7439-12152 bp Neighborhood of RT #1 [7439, 12152] RVT-Retrons Arm-DNA-bind_3 Feature: gene Location: 7439-7621 bp Feature: gene Location: 7765-7923 bp Feature: gene Location: 7871-9706 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8006-8705 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8006-8705 bp Feature: gene Location: 10172-10396 bp Feature: domain Description: Arm-DNA-bind_3 Location: 10181-10385 bp Feature: domain Description: Arm-DNA-bind_3 Location: 10181-10385 bp Feature: gene Location: 10974-12152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Arm-DNA-bind_3 (pfam13356)

Seq: UKWJ01000025.1 Klebsiella pneumoniae strain EuSCAPE_IT375 genome assembly, contig: 18174_7106SCcontig000025, whole genome shotgun sequence (48605 bp)
Overview 1 RT 1: 6834-13074 bp Neighborhood of RT #1 [6834, 13074] XRE RVT-UG1 Feature: gene Location: 6834-7631 bp Feature: domain Description: XRE Location: 6837-7023 bp Feature: domain Description: XRE Location: 683 7-7023 bp Feature: gene Location: 7930-8364 bp Feature: gene Location: 8373-12071 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 8985-9495 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 8985-9495 bp Feature: gene Location: 12134-12334 bp Feature: gene Location: 12904-13074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XRE (COG1476), RVT-UG1