myRT

myRT report for GCA_900515575.1_18174_7_123

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Seq: UKWS01000016.1 Klebsiella pneumoniae strain EuSCAPE_IT391 genome assembly, contig: 18174_7123SCcontig000016, whole genome shotgun sequence (151711 bp)
Overview 1 RT 1: 112852-119720 bp Neighborhood of RT #1 [112852, 119722] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 1 1 2900-1 1 3563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 1 1 3669-1 1 621 0 bp Feature: gene Location: 116221-118299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-117073 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6629-1 1 7073 bp Feature: gene Location: 118356-118796 bp Feature: domain Description: Integrase_1 Location: 118362-118578 bp Feature: domain Description: Integrase_1 Location: 1 1 8362-1 1 8578 bp Feature: gene Location: 119057-119722 bp Feature: domain Description: INT_P4_C Location: 119162-119720 bp Feature: domain Description: INT_P4_C Location: 1 1 91 62-1 1 9720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UKWS01000030.1 Klebsiella pneumoniae strain EuSCAPE_IT391 genome assembly, contig: 18174_7123SCcontig000030, whole genome shotgun sequence (24004 bp)
Overview 1 RT 1: 9746-14768 bp Neighborhood of RT #1 [9746, 14776] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 9746-10711 bp Feature: domain Description: ArdC Location: 9872-10706 bp Feature: domain Description: ArdC Location: 9872 -10706 bp Feature: gene Location: 10843-11112 bp Feature: gene Location: 11181-12668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11586-12276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11586-12 2 76 bp Feature: gene Location: 12822-13505 bp Feature: domain Description: PRK10276 Location: 13125-13488 bp Feature: domain Description: PRK102 76 Location: 1312 5-13488 bp Feature: gene Location: 13505-14776 bp Feature: domain Description: umuC Location: 13508-14768 bp Feature: domain Description: umuC Location: 13508-14768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: UKWS01000034.1 Klebsiella pneumoniae strain EuSCAPE_IT391 genome assembly, contig: 18174_7123SCcontig000034, whole genome shotgun sequence (15635 bp)
Overview 1 RT 1: 7608-10816 bp Neighborhood of RT #1 [7608, 10816] PRK10276 RVT-GII Feature: gene Location: 7608-8033 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: domain Description: PRK10276 Location: 7611-8019 bp Feature: gene Location: 8151-8384 bp Feature: gene Location: 8435-9970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8840-9578 bp Feature: gene Location: 10204-10434 bp Feature: gene Location: 10493-10816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: UKWS01000038.1 Klebsiella pneumoniae strain EuSCAPE_IT391 genome assembly, contig: 18174_7123SCcontig000038, whole genome shotgun sequence (10902 bp)
Overview 1 RT 1: 750-3228 bp Neighborhood of RT #1 [750, 3386] RVT-GII GIIM Tra5 Feature: gene Location: 750-2273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1023-1755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1023-1755 bp Feature: domain Description: GIIM Note: maturase Location: 1830-2028 bp Feature: domain Description: GIIM Note: maturase Location: 1830-2028 bp Feature: gene Location: 2360-2545 bp Feature: gene Location: 2697-3386 bp Feature: domain Description: Tra5 Location: 2802-3228 bp Feature: domain Description: Tra5 Location: 2802-3228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801)