myRT

myRT report for GCA_900515625.1_18174_7_131

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Seq: UKWZ01000015.1 Klebsiella pneumoniae strain EuSCAPE_IT399 genome assembly, contig: 18174_7131SCcontig000015, whole genome shotgun sequence (117060 bp)
Overview 1 RT 1: 112852-116971 bp Neighborhood of RT #1 [112852, 117048] FimC FimD RVT-UG4 Feature: gene Location: 112852-113580 bp Feature: domain Description: FimC Location: 112900-113563 bp Feature: domain Description: FimC Location: 1 1 2900-1 1 3563 bp Feature: gene Location: 113612-116221 bp Feature: domain Description: FimD Location: 113669-116210 bp Feature: domain Description: FimD Location: 1 1 3669-1 1 621 0 bp Feature: gene Location: 116221-117048 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116629-116971 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6629-1 1 6971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4

Seq: UKWZ01000036.1 Klebsiella pneumoniae strain EuSCAPE_IT399 genome assembly, contig: 18174_7131SCcontig000036, whole genome shotgun sequence (24417 bp)
Overview 1 RT 1: 5419-10441 bp Neighborhood of RT #1 [5419, 10449] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 5419-6384 bp Feature: domain Description: ArdC Location: 5545-6379 bp Feature: domain Description: ArdC Location: 5545-6379 bp Feature: gene Location: 6516-6785 bp Feature: gene Location: 6854-8341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7259-7949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 59-7949 bp Feature: gene Location: 8366-9178 bp Feature: domain Description: PRK10276 Location: 8798-9161 bp Feature: domain Description: PRK102 76 Location: 8798-9161 bp Feature: gene Location: 9178-10449 bp Feature: domain Description: umuC Location: 9181-10441 bp Feature: domain Description: umuC Location: 9181-10441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)