myRT

myRT report for GCA_900515865.1_18174_7_48

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Seq: UKXZ01000028.1 Klebsiella pneumoniae strain EuSCAPE_IT315 genome assembly, contig: 18174_748SCcontig000028, whole genome shotgun sequence (14085 bp)
Overview 1 RT 1: 4720-7990 bp Neighborhood of RT #1 [4720, 8004] RVT-GII PRK10276 Feature: gene Location: 4720-4935 bp Feature: gene Location: 5202-5432 bp Feature: gene Location: 5666-7177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071-6785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6071 -6785 bp Feature: gene Location: 7228-7461 bp Feature: gene Location: 7579-8004 bp Feature: domain Description: PRK10276 Location: 7582-7990 bp Feature: domain Description: PRK1 0276 Location: 7582-7990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UKXZ01000011.1 Klebsiella pneumoniae strain EuSCAPE_IT315 genome assembly, contig: 18174_748SCcontig000011, whole genome shotgun sequence (187336 bp)
Overview 1 RT 1: 28325-38033 bp Neighborhood of RT #1 [28325, 38053] AAA_13 AAA_13 COG0610 RVT-Retrons AAA_15 AAA_15 COG2958 Feature: gene Location: 28325-29503 bp Feature: domain Description: AAA_13 Location: 28418-28592 bp Feature: domain Description: AAA_13 Location: 2 8418-2 8592 bp Feature: domain Description: AAA_13 Location: 28814-29387 bp Feature: domain Description: AAA_13 Location: 2 8814-2 9387 bp Feature: gene Location: 29496-32615 bp Feature: domain Description: COG0610 Location: 29580-32592 bp Feature: domain Description: COG0610 Location: 2 9580-32 592 bp Feature: gene Location: 33157-34257 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33298-33862 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 332 98-33862 bp Feature: gene Location: 34430-36547 bp Feature: domain Description: AAA_15 Location: 34433-34850 bp Feature: domain Description: AAA_15 Location: 34433-34850 bp Feature: domain Description: AAA_15 Location: 34988-35414 bp Feature: domain Description: AAA_15 Location: 34988-35414 bp Feature: gene Location: 37121-38053 bp Feature: domain Description: COG2958 Location: 37139-38033 bp Feature: domain Description: COG2 958 Location: 37139-38033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-Retrons, AAA_15 (pfam13175), COG2958 (Uncharacterized protein )